SCOPe 2.03: Domain d1rmda1: 1rmd A:87-116

Lineage for d1rmda1 (1rmd A:87-116)

1. Root: SCOPe 2.03

2. Class g: Small proteins [56992] (90 folds)

3. Fold g.37: beta-beta-alpha zinc fingers [57666] (1 superfamily)
   simple fold, consisting of the N-terminal beta-hairpin and C-terminal alpha-helical region; each part provides two zinc-coordinating residues with the observed sequences including C2H2, C2HC and CHHC

4. Superfamily g.37.1: beta-beta-alpha zinc fingers [57667] (8 families)

5. Family g.37.1.1: Classic zinc finger, C2H2 [57668] (31 proteins)

6. Protein V(D)J recombination activating protein 1 (RAG1), dimerization domain [57671] (1 species)

7. Species Mouse (Mus musculus) [TaxId:10090] [57672] (1 PDB entry)

8. Domain d1rmda1: 1rmd A:87-116 [45025]
   Other proteins in same PDB: d1rmda2
   complexed with zn

Details for d1rmda1

PDB Entry: 1rmd, 2.1 Å

PDB Description: rag1 dimerization domain

PDB Compounds: (A:) rag1

SCOPe Domain Sequences for d1rmda1:

Sequence; same for both SEQRES and ATOM records:

>d1rmda1 g.37.1.1 (A:87-116) V(D)J recombination activating protein 1 (RAG1), dimerization domain {Mouse (Mus musculus) [TaxId: 10090]}
lmvkcpaqdcneevslekynhhvsshkesk

Timeline for d1rmda1:

• d1rmda1 first appeared (with stable ids) in SCOP 1.55, called d1rmd_1
  
• d1rmda1 appears in SCOPe 2.02
  
• d1rmda1 appears in SCOPe 2.04
  
• d1rmda1 appears in the current release, SCOPe 2.08