SCOPe 2.01: Domain d1pvla_: 1pvl A:

Lineage for d1pvla_ (1pvl A:)

1. Root: SCOPe 2.01

2. Class f: Membrane and cell surface proteins and peptides [56835] (57 folds)

3. Fold f.6: Leukocidin-like [56958] (1 superfamily)
   subunit fold contains beta-sandwich of Ig-like (grerk-key) topology and a beta-ribbon arm that forms an oligomeric transmembrane barrel

4. Superfamily f.6.1: Leukocidin-like [56959] (2 families)

5. Family f.6.1.1: Leukocidin (pore-forming toxin) [56960] (5 proteins)
   heptameric fold contains barrel (n=14, S=14) formed by beta-ribbon arms, one from each subunit

6. Protein Leucocidin K component LukF-PV [56963] (1 species)

7. Species Staphylococcus aureus [TaxId:1280] [56964] (1 PDB entry)

8. Domain d1pvla_: 1pvl A: [43819]
   complexed with mes

Details for d1pvla_

PDB Entry: 1pvl, 2 Å

PDB Description: structure of the panton-valentine leucocidin f component from staphylococcus aureus

PDB Compounds: (A:) leucocidin

SCOPe Domain Sequences for d1pvla_:

Sequence, based on SEQRES records:

>d1pvla_ f.6.1.1 (A:) Leucocidin K component LukF-PV {Staphylococcus aureus [TaxId: 1280]}
aqhitpvsekkvddkitlykttatsdsdklkisqiltfnfikdksydkdtlilkaagniy
sgytkpnpkdtissqfywgskynisinsdsndsvnvvdyapknqneefqvqqtvgysygg
dinisnglsgggngsksfsetinykqesyrtsldkrtnfkkigwdveahkimnngwgpyg
rdsyhstygnemflgsrqsnlnagqnfleyhkmpvlsrgnfnpefigvlsrkqnaakksk
itvtyqremdrytnfwnqlhwignnykdenrathtsiyevdwenhtvklidtqskeknpm
s

Sequence, based on observed residues (ATOM records):

>d1pvla_ f.6.1.1 (A:) Leucocidin K component LukF-PV {Staphylococcus aureus [TaxId: 1280]}
aqhitpvsekkvddkitlykttatsdsdklkisqiltfnfikdksydkdtlilkaagniy
sgytkpnpkdtissqfywgskynisinsdsndsvnvvdyapknqneefqvqqtvgysygg
dinisnglsgggksfsetinykqesyrtsldkrtnfkkigwdveahkimnngwgpygrds
yhstygnemflgsrqsnlnagqnfleyhkmpvlsrgnfnpefigvlsrkqnaakkskitv
tyqremdrytnfwnqlhwignnykdenrathtsiyevdwenhtvklidtqskeknpms

Timeline for d1pvla_:

• d1pvla_ first appeared (with stable ids) in SCOP 1.55, called d1pvl__
  
• d1pvla_ appears in SCOP 1.75
  
• d1pvla_ appears in SCOPe 2.02
  
• d1pvla_ appears in the current release, SCOPe 2.08