SCOPe 2.01: Domain d1gfma_: 1gfm A:

Lineage for d1gfma_ (1gfm A:)

1. Root: SCOPe 2.01

2. Class f: Membrane and cell surface proteins and peptides [56835] (57 folds)

3. Fold f.4: Transmembrane beta-barrels [56924] (6 superfamilies)
   not a true fold, gathers together transmembrane barrels of different (n,S)

4. Superfamily f.4.3: Porins [56935] (4 families)

5. Family f.4.3.1: Porin [56936] (2 proteins)
   trimer, one subunit folds into (16,20) barrel

6. Protein Porin [56937] (5 species)

7. Species Escherichia coli, different sequences [TaxId:562] [56938] (15 PDB entries)

8. Domain d1gfma_: 1gfm A: [43755]
   complexed with c8e; mutant

Details for d1gfma_

PDB Entry: 1gfm, 3.5 Å

PDB Description: ompf porin (mutant d113g)

PDB Compounds: (A:) matrix porin outer membrane protein f

SCOPe Domain Sequences for d1gfma_:

Sequence; same for both SEQRES and ATOM records:

>d1gfma_ f.4.3.1 (A:) Porin {Escherichia coli, different sequences [TaxId: 562]}
aeiynkdgnkvdlygkavglhyfskgngensyggngdmtyarlgfkgetqinsdltgygq
weynfqgnnsegadaqtgnktrlafaglkyadvgsfdygrnygvvydalgytgmlpefgg
dtaysddffvgrvggvatyrnsnffglvdglnfavqylgknerdtarrsngdgvggsisy
eyegfgivgaygaadrtnlqeaqplgngkkaeqwatglkydanniylaanygetrnatpi
tnkftntsgfanktqdvllvaqyqfdfglrpsiaytkskakdvegigdvdlvnyfevgat
yyfnknmstyvdyiinqidsdnklgvgsddtvavgivyqf

Timeline for d1gfma_:

• d1gfma_ first appeared (with stable ids) in SCOP 1.55, called d1gfm__
  
• d1gfma_ appears in SCOP 1.75
  
• d1gfma_ appears in SCOPe 2.02
  
• d1gfma_ appears in the current release, SCOPe 2.08