Lineage for d1wafb2 (1waf B:376-903)

  1. Root: SCOP 1.69
  2. 517079Class e: Multi-domain proteins (alpha and beta) [56572] (46 folds)
  3. 517941Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
    divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members
  4. 517942Superfamily e.8.1: DNA/RNA polymerases [56672] (6 families) (S)
    "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain
  5. 517943Family e.8.1.1: DNA polymerase I [56673] (3 proteins)
  6. 518007Protein Family B DNA polymerase [56680] (6 species)
  7. 518017Species Bacteriophage RB69 [TaxId:12353] [56681] (8 PDB entries)
  8. 518028Domain d1wafb2: 1waf B:376-903 [43009]
    Other proteins in same PDB: d1wafa1, d1wafb1

Details for d1wafb2

PDB Entry: 1waf (more details), 3.2 Å

PDB Description: dna polymerase from bacteriophage rb69

SCOP Domain Sequences for d1wafb2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1wafb2 e.8.1.1 (B:376-903) Family B DNA polymerase {Bacteriophage RB69}
qnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfk
vaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrn
geiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmta
qinrkllinslygalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegea
fvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymn
nkqhlmfmdreaiagpplgskgiggfwtgkkryalnvwdmegtryaepklkimgletqks
stpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvgg
fpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteit
dlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf

SCOP Domain Coordinates for d1wafb2:

Click to download the PDB-style file with coordinates for d1wafb2.
(The format of our PDB-style files is described here.)

Timeline for d1wafb2:

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Domains from same chain:
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d1wafb1