SCOPe 2.08: Domain d1flod2: 1flo D:138-423

Lineage for d1flod2 (1flo D:138-423)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.163: DNA breaking-rejoining enzymes [56348] (1 superfamily)
   core: alpha3-beta3-alpha4; one side of beta-sheet is exposed

4. Superfamily d.163.1: DNA breaking-rejoining enzymes [56349] (2 families)

5. Family d.163.1.1: Lambda integrase-like, catalytic core [56350] (6 proteins)

6. Protein Flp recombinase [56359] (1 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [56360] (3 PDB entries)

8. Domain d1flod2: 1flo D:138-423 [42169]
   Other proteins in same PDB: d1floa1, d1flob1, d1floc1, d1flod1
   protein/DNA complex; complexed with phs
   has additional insertions and/or extensions that are not grouped together

Details for d1flod2

PDB Entry: 1flo, 2.65 Å

PDB Description: FLP Recombinase-Holliday Junction Complex I

PDB Compounds: (D:) flp recombinase

SCOPe Domain Sequences for d1flod2:

Sequence, based on SEQRES records:

>d1flod2 d.163.1.1 (D:138-423) Flp recombinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
shskkmlkallsegesiweitekilnsfeytsrftktktlyqflflatfincgrfsdikn
vdpksfklvqnkylgviiqclvtetktsvsrhiyffsargridplvyldeflrnsepvlk
rvnrtgnsssnkqeyqllkdnlvrsynkalkknapysifaikngpkshigrhlmtsflsm
kglteltnvvgnwsdkrasavarttythqitaipdhyfalvsryyaydpiskemialkde
tnpieewqhieqlkgsaegsirypawngiisqevldylssyinrri

Sequence, based on observed residues (ATOM records):

>d1flod2 d.163.1.1 (D:138-423) Flp recombinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
shskkmlkallsegesiweitekilnsfeytsrftktktlyqflflatfincgrfsdikn
vdpksfklvqnkylgviiqclvtetktsvsrhiyffsargridplvyldeflrnsepvlk
rvnrtgssnkqeyqllkdnlvrsynkalkknapysifaikngpkshigrhlmtsflsmkg
lteltnvvgnwsdkrasavarttythqitaipdhyfalvsryyaydpiskemialkdetn
pieewqhieqsirypawngiisqevldylssyinrri

Timeline for d1flod2:

• d1flod2 first appeared (with stable ids) in SCOP 1.55
  
• d1flod2 appears in SCOPe 2.07