SCOPe 2.08: Family d.163.1.1: Lambda integrase-like, catalytic core

Lineage for Family d.163.1.1: Lambda integrase-like, catalytic core

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.163: DNA breaking-rejoining enzymes [56348] (1 superfamily)
   core: alpha3-beta3-alpha4; one side of beta-sheet is exposed

4. Superfamily d.163.1: DNA breaking-rejoining enzymes [56349] (2 families)

5. Family d.163.1.1: Lambda integrase-like, catalytic core [56350] (6 proteins)

Proteins:

1. Cre recombinase [56355] (1 species)

   • Species Bacteriophage P1 [TaxId:10678] [56356] (20 PDB entries)
     Uniprot P06956 20-341

2. Flp recombinase [56359] (1 species)

   • Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [56360] (3 PDB entries)

3. Integrase [56351] (1 species)

   • Species Bacteriophage HP1 [TaxId:10690] [56352] (1 PDB entry)

4. Integrase (Int) [56353] (2 species)

   1. Species Bacteriophage lambda [TaxId:10710] [56354] (5 PDB entries)

   2. Species Enterobacteria phage [TaxId:10679] [311112] (2 PDB entries)

5. Recombinase XerD [56357] (1 species)

   • Species Escherichia coli [TaxId:562] [56358] (1 PDB entry)

6. automated matches [254540] (1 species)
   not a true protein

   • Species Enterobacteria phage [TaxId:10678] [255220] (1 PDB entry)

More info for Family d.163.1.1: Lambda integrase-like, catalytic core

Timeline for Family d.163.1.1: Lambda integrase-like, catalytic core:

• Family d.163.1.1: Lambda integrase-like, catalytic core first appeared (with stable ids) in SCOP 1.55
  
• Family d.163.1.1: Lambda integrase-like, catalytic core appears in SCOPe 2.07