SCOP 1.65: Domain d1atib2: 1ati B:1-394

Lineage for d1atib2 (1ati B:1-394)

1. Root: SCOP 1.65

2. Class d: Alpha and beta proteins (a+b) [53931] (234 folds)

3. Fold d.104: Class II aaRS and biotin synthetases [55680] (1 superfamily)
   contains large mixed beta-sheet

4. Superfamily d.104.1: Class II aaRS and biotin synthetases [55681] (2 families)

5. Family d.104.1.1: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalyic domain [55682] (12 proteins)

6. Protein Glycyl-tRNA synthetase (GlyRS) [55692] (1 species)

7. Species Thermus thermophilus [TaxId:274] [55693] (3 PDB entries)

8. Domain d1atib2: 1ati B:1-394 [40746]
   Other proteins in same PDB: d1atia1, d1atib1

Details for d1atib2

PDB Entry: 1ati, 2.75 Å

PDB Description: crystal structure of glycyl-trna synthetase from thermus thermophilus

SCOP Domain Sequences for d1atib2:

Sequence, based on SEQRES records:

>d1atib2 d.104.1.1 (B:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus}
aassldelvalckrrgfifqsseiygglqgvydygplgvelknnlkqawwrrnvyerddm
egldasvlthrlvlhysgheatfadpmvdnritkkryrldhllkeqpeevlkrlyramev
eeenlhalvqammqaperaggamtaagvldpasgepgdwtppryfnmmfqdlrgprggrg
llaylrpetaqgifvnfknvldatsrklgfgiaqigkafrneitprnfifrvrefeqmei
eyfvrpgedeywhrywveerlkwwqemglsrenlvpyqqppessahyakatvdilyrfph
gslelegiaqrtdfdlgshtkdqealgitarvlrnehstqrlayrdpetgkwfvpyviep
sagvdrgvlallaeaftreelpngeerivlklkp

Sequence, based on observed residues (ATOM records):

>d1atib2 d.104.1.1 (B:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus}
aassldelvalckrrgfifqsseiygglqgvydygplgvelknnlkqawwrrnvyerddm
egldasvlthrlvlhysgheatfadpmvdwtppryfnmmfqdlrgprggrgllaylrpet
aqgifvnfknvldatsrklgfgiaqigkafrneitprnfifrvrefeqmeieyfvrpged
eywhrywveerlkwwqemglsrenlvpyqqppessahyakatvdilyrfphgslelegia
qrtdfdlgshtkdqealgitarvlrnehstqrlayrdpetgkwfvpyviepsagvdrgvl
allaeaftreelpngeerivlklkp

Timeline for d1atib2:

• d1atib2 first appeared (with stable ids) in SCOP 1.55
  
• d1atib2 appears in SCOP 1.63
  
• d1atib2 appears in SCOP 1.67
  
• d1atib2 appears in the current release, SCOPe 2.08