SCOP 1.71: Domain d1kmnd2: 1kmn D:2-325

Lineage for d1kmnd2 (1kmn D:2-325)

1. Root: SCOP 1.71

2. Class d: Alpha and beta proteins (a+b) [53931] (286 folds)

3. Fold d.104: Class II aaRS and biotin synthetases [55680] (1 superfamily)
   contains large mixed beta-sheet

4. Superfamily d.104.1: Class II aaRS and biotin synthetases [55681] (2 families)

5. Family d.104.1.1: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain [55682] (15 proteins)

6. Protein Histidyl-tRNA synthetase (HisRS) [55688] (3 species)

7. Species Escherichia coli [TaxId:562] [55689] (3 PDB entries)

8. Domain d1kmnd2: 1kmn D:2-325 [40734]
   Other proteins in same PDB: d1kmna1, d1kmnb1, d1kmnc1, d1kmnd1
   complexed with atp, hso

Details for d1kmnd2

PDB Entry: 1kmn, 2.8 Å

PDB Description: histidyl-trna synthetase complexed with histidinol and atp

SCOP Domain Sequences for d1kmnd2:

Sequence, based on SEQRES records:

>d1kmnd2 d.104.1.1 (D:2-325) Histidyl-tRNA synthetase (HisRS) {Escherichia coli}
akniqairgmndylpgetaiwqriegtlknvlgsygyseirlpiveqtplfkraigevtd
vvekemytfedrngdsltlrpegtagcvragiehgllynqeqrlwyigpmfrherpqkgr
yrqfhqlgcevfglqgpdidaelimltarwwralgisehvtlelnsigslearanyrdal
vafleqhkekldedckrrmytnplrvldsknpevqallndapalgdyldeesrehfaglc
kllesagiaytvnqrlvrgldyynrtvfewvtnslgsqgtvcaggrydglveqlggratp
avgfamglerlvllvqavnpefka

Sequence, based on observed residues (ATOM records):

>d1kmnd2 d.104.1.1 (D:2-325) Histidyl-tRNA synthetase (HisRS) {Escherichia coli}
akniqairgmndylpgetaiwqriegtlknvlgsygyseirlpiveqtplfkraigevtd
vvekemytfedrngdsltlrpegtagcvragiehgllynqeqrlwyigpmfrherpqkgr
yrqfhqlgcevfglqgpdidaelimltarwwralgisehvtlelnsigldeesrehfagl
ckllesagiaytvnqrlvrgldyynrtvfewvtnslgsqgtvcaggrydglveqlggrat
pavgfamglerlvllvqavnpefka

Timeline for d1kmnd2:

• d1kmnd2 first appeared (with stable ids) in SCOP 1.55
  
• d1kmnd2 appears in SCOP 1.69
  
• d1kmnd2 appears in SCOP 1.73
  
• d1kmnd2 appears in the current release, SCOPe 2.08