SCOPe 2.08: Domain d6z9gb_: 6z9g B:

Lineage for d6z9gb_ (6z9g B:)

1. Root: SCOPe 2.08

2. Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)

3. Fold e.18: HydB/Nqo4-like [56761] (1 superfamily)
   3 domains: (1) all-alpha; (2&3) alpha+beta

4. Superfamily e.18.1: HydB/Nqo4-like [56762] (3 families)

5. Family e.18.1.1: Nickel-iron hydrogenase, large subunit [56763] (2 proteins)

6. Protein automated matches [190109] (8 species)
   not a true protein

7. Species Desulfovibrio vulgaris [TaxId:882] [189199] (13 PDB entries)

8. Domain d6z9gb_: 6z9g B: [393909]
   Other proteins in same PDB: d6z9ga_, d6z9gc_, d6z9ge_, d6z9gg_
   automated match to d4kl8l_
   complexed with 6ml, cl, fco, fe2, h2s, ni, sf4

Details for d6z9gb_

PDB Entry: 6z9g, 1.76 Å

PDB Description: structure of [nifese] hydrogenase g491a variant from desulfovibrio vulgaris hildenborough pressurized with oxygen gas - structure g491a- o2

PDB Compounds: (B:) periplasmic [nifese] hydrogenase, large subunit, selenocysteine-containing

SCOPe Domain Sequences for d6z9gb_:

Sequence; same for both SEQRES and ATOM records:

>d6z9gb_ e.18.1.1 (B:) automated matches {Desulfovibrio vulgaris [TaxId: 882]}
grttiaidpvtrieghlkaevvvengkvvdarlsggmyrgfetilrgrdprdasqivqri
cgvcptahstasvlaldeafgakvpnngritrnlifganylqshilhfyhlsaqdfvqgp
dtapfvprfpksdlrlskelnkagvdqyiealevrrichemvalfggrmphvqgqvvgga
teiptkeklveyaarfkkvrdfveqkyvpvvytigskykdmfkvgqgfkaalcvgafpld
nsgkkhlfmpgvyakgkdmpfdpskikeyvkyswfaeettglnykegktipapdkagays
fvkaprydglslevgplarmwvnnpelspvgkkllkdlfgisakkfrdlgeeaafslmgr
hvaraeetyymlgaiegwlkeikagedtvvmpavpasaegtgfteaprgsllhyvkvkds
kidnyqivsaslwncnprddmgqrgaveealigipvddiqnpvnvarlirafdpalacav
h

Timeline for d6z9gb_:

• d6z9gb_ first appeared in SCOPe 2.07