SCOPe 2.07: Domain d6jz4b3: 6jz4 B:279-597

Lineage for d6jz4b3 (6jz4 B:279-597)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.0: automated matches [191314] (1 protein)
   not a true family

6. Protein automated matches [190075] (125 species)
   not a true protein

7. Species Ruminococcus gnavus [TaxId:33038] [361249] (8 PDB entries)

8. Domain d6jz4b3: 6jz4 B:279-597 [386462]
   Other proteins in same PDB: d6jz4a1, d6jz4a2, d6jz4b1, d6jz4b2
   automated match to d5c70a3
   complexed with eva, mrd

Details for d6jz4b3

PDB Entry: 6jz4, 1.71 Å

PDB Description: b-glucuronidase from ruminococcus gnavus in complex with d-glucaro-d- lactam

PDB Compounds: (B:) beta-glucuronidase

SCOPe Domain Sequences for d6jz4b3:

Sequence, based on SEQRES records:

>d6jz4b3 c.1.8.0 (B:279-597) automated matches {Ruminococcus gnavus [TaxId: 33038]}
vriegtkillndrpvylkgfgkhedfpilgrgfhwgivkrdfeclkwtnancfrtshypy
aeewyqfadeegfliidevpavgmmrstrnfvaagsgnytyffealtvpellkshiadte
emitrdknhpsviawslfnepetitdyayeyfkevfaaaetydfqsrpmtgafeknskpe
lckcyplcdficlnryygwyisggpeieeaeelfrdemdrwkakelnvpfvftefgtdtm
aglhklpsimwseeyqkeylemnfrvfdsyefvqgelawnfadfqttegimrvdgnhkgv
ftrdrqpkaaavvfkdrwe

Sequence, based on observed residues (ATOM records):

>d6jz4b3 c.1.8.0 (B:279-597) automated matches {Ruminococcus gnavus [TaxId: 33038]}
vriegtkillndrpvylkgfgkhedfpilgrgfhwgivkrdfeclkwtnancfrtshypy
aeewyqfadeegfliidevpavgmmaltvpellkshiadteemitrdknhpsviawslfn
epetitdyayeyfkevfaaaetydfqsrpmtgafeknskpelckcyplcdficlnryygw
yisggpeieeaeelfrdemdrwkakelnvpfvftefgtdtmaglhklpsimwseeyqkey
lemnfrvfdsyefvqgelawnfadfqttegimrvdgnhkgvftrdrqpkaaavvfkdrwe

Timeline for d6jz4b3:

• d6jz4b3 is new in SCOPe 2.07-stable
  
• d6jz4b3 appears in the current release, SCOPe 2.08