SCOPe 2.04: Domain d1emba_: 1emb A:

Lineage for d1emba_ (1emb A:)

1. Root: SCOPe 2.04

2. Class d: Alpha and beta proteins (a+b) [53931] (380 folds)

3. Fold d.22: GFP-like [54510] (1 superfamily)
   beta-sheet folds into a barrel (n=11, S=14) around the central helix

4. Superfamily d.22.1: GFP-like [54511] (3 families)

5. Family d.22.1.1: Fluorescent proteins [54512] (6 proteins)

6. Protein Green fluorescent protein, GFP [54513] (4 species)

7. Species Jellyfish (Aequorea victoria) [TaxId:6100] [54514] (160 PDB entries)
   Uniprot P42212

8. Domain d1emba_: 1emb A: [38344]

Details for d1emba_

PDB Entry: 1emb, 2.13 Å

PDB Description: green fluorescent protein (gfp) from aequorea victoria, gln 80 replaced with arg

PDB Compounds: (A:) Green fluorescent protein

SCOPe Domain Sequences for d1emba_:

Sequence; same for both SEQRES and ATOM records:

>d1emba_ d.22.1.1 (A:) Green fluorescent protein, GFP {Jellyfish (Aequorea victoria) [TaxId: 6100]}
skgeelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptlv
ttfgygvqcfsrypdhmkrhdffksampegyvqertiffkddgnyktraevkfegdtlvn
rielkgidfkedgnilghkleynynshnvyimadkqkngikvnfkirhniedgsvqladh
yqqntpigdgpvllpdnhylstqsalskdpnekrdhmvllefvtaagi

Timeline for d1emba_:

• d1emba_ first appeared (with stable ids) in SCOP 1.55, called d1emb__
  
• d1emba_ appears in SCOPe 2.03
  
• d1emba_ appears in SCOPe 2.05
  
• d1emba_ appears in the current release, SCOPe 2.08