Lineage for d6r39a_ (6r39 A:)

  1. Root: SCOPe 2.08
  2. 2685877Class a: All alpha proteins [46456] (290 folds)
  3. 2731436Fold a.128: Terpenoid synthases [48575] (1 superfamily)
    multihelical; core: 8 helices (C-J) are arranged in 2 parallel layers
  4. 2731437Superfamily a.128.1: Terpenoid synthases [48576] (6 families) (S)
    duplication: two metal-binding sites are related by a pseudo dyad that also relates helices C-F to helices G-J
  5. 2731887Family a.128.1.0: automated matches [196408] (1 protein)
    not a true family
  6. 2731888Protein automated matches [196409] (46 species)
    not a true protein
  7. 2732224Species Trypanosome (Trypanosoma brucei) [TaxId:5691] [230726] (37 PDB entries)
  8. 2732273Domain d6r39a_: 6r39 A: [383355]
    automated match to d2ogda_
    complexed with bfh

Details for d6r39a_

PDB Entry: 6r39 (more details), 2.6 Å

PDB Description: t. brucei fpps in complex with 1-(carboxymethyl)-1h-benzo[g]indole-2- carboxylic acid
PDB Compounds: (A:) farnesyl pyrophosphate synthase

SCOPe Domain Sequences for d6r39a_:

Sequence, based on SEQRES records: (download)

>d6r39a_ a.128.1.0 (A:) automated matches {Trypanosome (Trypanosoma brucei) [TaxId: 5691]}
mpmqmfmqvydeiqmflleelelkfdmdpnrvrylrkmmdttclggkynrgltvidvaes
llslspnnngeeddgarrkrvlhdacvcgwmieflqahylveddimdnsvtrrgkpcwyr
hpdvtvqcaindglllkswthmmamhffadrpflqdllcrfnrvdyttavgqlydvtsmf
dsnkldpdvsqptttdfaeftlsnykrivkyktayytyllplvmglivsealptvdmgvt
eelamlmgeyfqvqddvmdcftpperlgkvgtdiqdakcswlavtflakassaqvaefka
nygsgdsekvatvrrlyeeadlqgdyvayeaavaeqvkelieklrlcspgfaasvetlwg
ktyk

Sequence, based on observed residues (ATOM records): (download)

>d6r39a_ a.128.1.0 (A:) automated matches {Trypanosome (Trypanosoma brucei) [TaxId: 5691]}
mpmqmfmqvydeiqmflleelelkfdmdpnrvrylrkmmdttclggkynrgltvidvaes
llslspdgarrkrvlhdacvcgwmieflqahylveddimddvtvqcaindglllkswthm
mamhffadrpflqdllcrfnrvdyttavgqlydvtsmfdfaeftlsnykrivkyktayyt
yllplvmglivsealptvdmgvteelamlmgeyfqvqddvmdcftpperlgkvgtdiqda
kcswlavtflakassaqvaefkanygsgdsekvatvrrlyeeadlqgdyvayeaavaeqv
kelieklrlcspgfaasvetlwgktyk

SCOPe Domain Coordinates for d6r39a_:

Click to download the PDB-style file with coordinates for d6r39a_.
(The format of our PDB-style files is described here.)

Timeline for d6r39a_: