SCOPe 2.08: Domain d6j1ua_: 6j1u A:

Lineage for d6j1ua_ (6j1u A:)

1. Root: SCOPe 2.08

2. Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)

3. Fold e.75: Flu NP-like [161002] (1 superfamily)
   consists of alpha+beta and all-alpha domains; biological unit is a trimer

4. Superfamily e.75.1: flu NP-like [161003] (1 family)
   automatically mapped to Pfam PF00506

5. Family e.75.1.1: Flu NP-like [161004] (2 proteins)
   Pfam PF00506; Influenza virus nucleoprotein

6. Protein Nucleocapsid protein [161005] (1 species)

7. Species Influenza A virus, different strains [TaxId:11320] [161006] (11 PDB entries)
   Uniprot Q1I2B5 21-489

8. Domain d6j1ua_: 6j1u A: [378717]
   automated match to d4dynb_
   complexed with b7o

Details for d6j1ua_

PDB Entry: 6j1u, 2.8 Å

PDB Description: influenza virus nucleoprotein with a specific inhibitor

PDB Compounds: (A:) nucleoprotein

SCOPe Domain Sequences for d6j1ua_:

Sequence, based on SEQRES records:

>d6j1ua_ e.75.1.1 (A:) Nucleocapsid protein {Influenza A virus, different strains [TaxId: 11320]}
nateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermvlsafderrnkyle
ehpsagkdpkktggpiyrrvdgkwrrelilydkeeirriwrqanngddataglthmmiwh
snlndatyqrtralvrtgmdprmcslmqgstlprrsgaagaavkgvgtmvmelirmikrg
indrnfwrgengrrtriayermcnilkgkfqtaaqrtmvdqvresrnpgnaefedlifla
rsalilrgsvahksclpacvygsavasgydferegyslvgidpfrllqnsqvyslirpne
npahksqlvwmachsaafedlrvssfirgtkvvprgklstrgvqiasnenmetmesstle
lrsrywairtrsggntnqqrassgqisiqptfsvqrnlpfdrptimaaftgntegrtsdm
rteiirlmesarpedvsfqgrgvfelsdekatspivpsfdmsnegsyff

Sequence, based on observed residues (ATOM records):

>d6j1ua_ e.75.1.1 (A:) Nucleocapsid protein {Influenza A virus, different strains [TaxId: 11320]}
nateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermvlsafdkktggpiy
rrvdgkwrrelilydkeeirriwrqanngddataglthmmiwhsnlndatyqrtralvrt
gmdprmcslmqgstlprrsgaagaavkgvgtmvmelirmikrgindrnfwrgengrrtri
ayermcnilkgkfqtaaqrtmvdqvresrnpgnaefedliflarsalilrgsvahksclp
acvygsavasgydferegyslvgidpfrllqnsqvyslirpnenpahksqlvwmachsaa
fedlrvssfirgtkvvprgklstrgvqiasnenmetmesstlelrsrywairtrsggnsg
qisiqptfsvqrnlpfdrptimaafsdmrteiirlmesarpedvsfqgrgvfelsdekat
spivpsfdmsnegsyff

Timeline for d6j1ua_:

• d6j1ua_ first appeared in SCOPe 2.07