PDB entry 6j1u

View 6j1u on RCSB PDB site
Description: influenza virus nucleoprotein with a specific inhibitor
Class: viral protein
Keywords: inhibitor, complex, influenza, H1N1, VIRAL PROTEIN
Deposited on 2018-12-29, released 2020-01-01
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-07-21, with a file datestamp of 2021-07-16.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: nucleoprotein
    Species: Influenza A virus (strain A/Wilson-Smith/1933 H1N1) [TaxId:381518]
    Gene: NP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6j1ua_
  • Chain 'B':
    Compound: nucleoprotein
    Species: Influenza A virus (strain A/Wilson-Smith/1933 H1N1) [TaxId:381518]
    Gene: NP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6j1ub_
  • Chain 'C':
    Compound: nucleoprotein
    Species: Influenza A virus (strain A/Wilson-Smith/1933 H1N1) [TaxId:381518]
    Gene: NP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6j1uc_
  • Heterogens: B7O

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6j1uA (A:)
matkgtkrsyeqmetdgerqnateirasvgkmidgigrfyiqmctelklsdyegrliqns
ltiermvlsafderrnkyleehpsagkdpkktggpiyrrvdgkwrrelilydkeeirriw
rqanngddataglthmmiwhsnlndatyqrtralvrtgmdprmcslmqgstlprrsgaag
aavkgvgtmvmelirmikrgindrnfwrgengrrtriayermcnilkgkfqtaaqrtmvd
qvresrnpgnaefedliflarsalilrgsvahksclpacvygsavasgydferegyslvg
idpfrllqnsqvyslirpnenpahksqlvwmachsaafedlrvssfirgtkvvprgklst
rgvqiasnenmetmesstlelrsrywairtrsggntnqqrassgqisiqptfsvqrnlpf
drptimaaftgntegrtsdmrteiirlmesarpedvsfqgrgvfelsdekatspivpsfd
msnegsyffgdnaeeydn

    Sequence, based on observed residues (ATOM records): (download) 
    >6j1uA (A:)
nateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermvlsafdkktggpiy
rrvdgkwrrelilydkeeirriwrqanngddataglthmmiwhsnlndatyqrtralvrt
gmdprmcslmqgstlprrsgaagaavkgvgtmvmelirmikrgindrnfwrgengrrtri
ayermcnilkgkfqtaaqrtmvdqvresrnpgnaefedliflarsalilrgsvahksclp
acvygsavasgydferegyslvgidpfrllqnsqvyslirpnenpahksqlvwmachsaa
fedlrvssfirgtkvvprgklstrgvqiasnenmetmesstlelrsrywairtrsggnsg
qisiqptfsvqrnlpfdrptimaafsdmrteiirlmesarpedvsfqgrgvfelsdekat
spivpsfdmsnegsyff

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6j1uB (B:)
matkgtkrsyeqmetdgerqnateirasvgkmidgigrfyiqmctelklsdyegrliqns
ltiermvlsafderrnkyleehpsagkdpkktggpiyrrvdgkwrrelilydkeeirriw
rqanngddataglthmmiwhsnlndatyqrtralvrtgmdprmcslmqgstlprrsgaag
aavkgvgtmvmelirmikrgindrnfwrgengrrtriayermcnilkgkfqtaaqrtmvd
qvresrnpgnaefedliflarsalilrgsvahksclpacvygsavasgydferegyslvg
idpfrllqnsqvyslirpnenpahksqlvwmachsaafedlrvssfirgtkvvprgklst
rgvqiasnenmetmesstlelrsrywairtrsggntnqqrassgqisiqptfsvqrnlpf
drptimaaftgntegrtsdmrteiirlmesarpedvsfqgrgvfelsdekatspivpsfd
msnegsyffgdnaeeydn

    Sequence, based on observed residues (ATOM records): (download) 
    >6j1uB (B:)
ateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermvlsafdpkktggpiy
rrvdgkwrrelilydkeeirriwrqanngddataglthmmiwhsnlndatyqrtralvrt
gmdprmcslmqgstlprrsgaagaavkgvgtmvmelirmikrgindrnfwrgengrrtri
ayermcnilkgkfqtaaqrtmvdqvresrnpgnaefedliflarsalilrgsvahksclp
acvygsavasgydferegyslvgidpfrllqnsqvyslirpnenpahksqlvwmachsaa
fedlrvssfirgtkvvprgklstrgvqiasnenmetmesstlelrsrywairtrsggnsg
qisiqptfsvqrnlpfdrptimaasdmrteiirlmesarpedvsfqgrgvfelsdekats
pivpsfdmsnegsyffg

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6j1uC (C:)
matkgtkrsyeqmetdgerqnateirasvgkmidgigrfyiqmctelklsdyegrliqns
ltiermvlsafderrnkyleehpsagkdpkktggpiyrrvdgkwrrelilydkeeirriw
rqanngddataglthmmiwhsnlndatyqrtralvrtgmdprmcslmqgstlprrsgaag
aavkgvgtmvmelirmikrgindrnfwrgengrrtriayermcnilkgkfqtaaqrtmvd
qvresrnpgnaefedliflarsalilrgsvahksclpacvygsavasgydferegyslvg
idpfrllqnsqvyslirpnenpahksqlvwmachsaafedlrvssfirgtkvvprgklst
rgvqiasnenmetmesstlelrsrywairtrsggntnqqrassgqisiqptfsvqrnlpf
drptimaaftgntegrtsdmrteiirlmesarpedvsfqgrgvfelsdekatspivpsfd
msnegsyffgdnaeeydn

    Sequence, based on observed residues (ATOM records): (download) 
    >6j1uC (C:)
nateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermvlsafderrnkdpk
ktggpiyrrvdgkwrrelilydkeeirriwrqanngddataglthmmiwhsnlndatyqr
tralvrtgmdprmcslmqgstlprrsgaagaavkgvgtmvmelirmikrgindrnfwrge
ngrrtriayermcnilkgkfqtaaqrtmvdqvresrnpgnaefedliflarsalilrgsv
ahksclpacvygsavasgydferegyslvgidpfrllqnsqvyslirpnenpahksqlvw
machsaafedlrvssfirgtkvvprgklstrgvqiasnenmetmesstlelrsrywairt
rsggntsgqisiqptfsvqrnlpfdrptimaafsdmrteiirlmesarpedvsfqgrgvf
elsdekatspivpsfdgsyffg