SCOPe 2.02: Domain d1dkib_: 1dki B:

Lineage for d1dkib_ (1dki B:)

1. Root: SCOPe 2.02

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.3: Cysteine proteinases [54000] (1 superfamily)
   consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn

4. Superfamily d.3.1: Cysteine proteinases [54001] (23 families)
   the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet

5. Family d.3.1.1: Papain-like [54002] (26 proteins)

6. Protein Streptococcal pyrogenic exotoxin B [54035] (1 species)

7. Species Streptococcus pyogenes [TaxId:1314] [54036] (2 PDB entries)
   Uniprot P00788 31-398

8. Domain d1dkib_: 1dki B: [37091]
   zymogen
   complexed with so4; mutant

Details for d1dkib_

PDB Entry: 1dki, 1.6 Å

PDB Description: crystal structure of the zymogen form of streptococcal pyrogenic exotoxin b active site (c47s) mutant

PDB Compounds: (B:) pyrogenic exotoxin b zymogen

SCOPe Domain Sequences for d1dkib_:

Sequence, based on SEQRES records:

>d1dkib_ d.3.1.1 (B:) Streptococcal pyrogenic exotoxin B {Streptococcus pyogenes [TaxId: 1314]}
arnekeakdsaitfiqksaaikagarsaedikldkvnlggelsgsnmyvynistggfviv
sgdkrspeilgystsgsfdvngkeniasfmesyveqikenkkldstyagtaeikqpvvks
lldskgihynqgnpynlltpviekvkpgeqsfvgqhaatgsvatataqimkyhnypnkgl
kdytytlssnnpyfnhpknlfaaistrqynwnnilptysgresnvqkmaiselmadvgis
vdmdygpssgsagssrvqralkenfgynqsvhqinrgdfskqdweaqidkelsqnqpvyy
qgvgkvgghafvidgadgrnfyhvnwgwggvsdgffrldalnpsalgtgggaggfngyqs
avvgikp

Sequence, based on observed residues (ATOM records):

>d1dkib_ d.3.1.1 (B:) Streptococcal pyrogenic exotoxin B {Streptococcus pyogenes [TaxId: 1314]}
arnekeakdkvnlggelsgsnmyvynistggfvivsgdkrspeilgystsgsfdvngken
iasfmesyveqikenkklqpvvkslldskgihynqgnpynlltpviekvkpgeqsfvgqh
aatgsvatataqimkyhnypnkglkdytytlssnnpyfnhpknlfaaistrqynwnnilp
tysgresnvqkmaiselmadvgisvdmdygpssgsagssrvqralkenfgynqsvhqinr
gdfskqdweaqidkelsqnqpvyyqgvgkvgghafvidgadgrnfyhvnwgwggvsdgff
rldalnpfngyqsavvgikp

Timeline for d1dkib_:

• d1dkib_ first appeared (with stable ids) in SCOP 1.55
  
• d1dkib_ appears in SCOPe 2.01
  
• d1dkib_ appears in SCOPe 2.03
  
• d1dkib_ appears in the current release, SCOPe 2.08