Lineage for d6i1da_ (6i1d A:)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2996664Fold d.157: Metallo-hydrolase/oxidoreductase [56280] (1 superfamily)
    duplication of beta(4)-alpha-beta-alpha motif; 4 layers a/b/b/a; mixed beta-sheets
  4. 2996665Superfamily d.157.1: Metallo-hydrolase/oxidoreductase [56281] (16 families) (S)
  5. 2997604Family d.157.1.0: automated matches [191360] (1 protein)
    not a true family
  6. 2997605Protein automated matches [190418] (31 species)
    not a true protein
  7. 2997612Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [364838] (1 PDB entry)
  8. 2997613Domain d6i1da_: 6i1d A: [364839]
    automated match to d2i7ta1
    protein/RNA complex; complexed with gol, zn

Details for d6i1da_

PDB Entry: 6i1d (more details), 2.28 Å

PDB Description: structure of the ysh1-mpe1 nuclease complex from s.cerevisiae
PDB Compounds: (A:) Endoribonuclease YSH1

SCOPe Domain Sequences for d6i1da_:

Sequence, based on SEQRES records: (download)

>d6i1da_ d.157.1.0 (A:) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
ntttfkffslggsnevgrschilqykgktvmldagihpayqglaslpfydefdlskvdil
lishfhldhaaslpyvmqrtnfqgrvfmthptkaiyrwllrdfvrvtsigsssssmgtkd
eglfsdedlvdsfdkietvdyhstvdvngikftafhaghvlgaamfqieiaglrvlftgd
ysrevdrhlnsaevpplssnvlivestfgtatheprlnrerkltqlihstvmrggrvllp
vfalgraqeimlildeywsqhadelgggqvpifyasnlakkcmsvfqtyvnmmnddirkk
frdsqtnpfifknisylrnledfqdfgpsvmlaspgmlqsglsrdllerwcpedknlvli
tgysiegtmakfimlepdtipsinnpeitiprrcqveeisfaahvdfqenlefiekisap
niilvhgeanpmgrlksallsnfaslkgtdnevhvfnprncvevdlefq

Sequence, based on observed residues (ATOM records): (download)

>d6i1da_ d.157.1.0 (A:) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
ntttfkffslggsnevgrschilqykgktvmldagihpayqglaslpfydefdlskvdil
lishfhldhaaslpyvmqrtnfqgrvfmthptkaiyrwllrdfvrvtsigglfsdedlvd
sfdkietvdyhstvdvngikftafhaghvlgaamfqieiaglrvlftgdysrevdrhlns
aevpplssnvlivestfgtatheprlnrerkltqlihstvmrggrvllpvfalgraqeim
lildeywsqhadelgggqvpifyasnlakkcmsvfqtyvnmmnddirkkfrdsqtnpfif
knisylrnledfqdfgpsvmlaspgmlqsglsrdllerwcpedknlvlitgysiegtmak
fimlepdtipsinnpeitiprrcqveeisfaahvdfqenlefiekisapniilvhgeanp
mgrlksallsnfaslkgtdnevhvfnprncvevdlefq

SCOPe Domain Coordinates for d6i1da_:

Click to download the PDB-style file with coordinates for d6i1da_.
(The format of our PDB-style files is described here.)

Timeline for d6i1da_: