Lineage for d5nria2 (5nri A:103-312)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2541368Fold d.142: ATP-grasp [56058] (2 superfamilies)
    Consists of two subdomains with different alpha+beta folds
    shares functional and structural similarities with the PIPK and protein kinase superfamilies
  4. 2541369Superfamily d.142.1: Glutathione synthetase ATP-binding domain-like [56059] (11 families) (S)
  5. 2541793Family d.142.1.0: automated matches [227184] (1 protein)
    not a true family
  6. 2541794Protein automated matches [226904] (37 species)
    not a true protein
  7. 2541824Species Burkholderia pseudomallei [TaxId:320372] [226352] (3 PDB entries)
  8. 3052913Domain d5nria2: 5nri A:103-312 [352975]
    Other proteins in same PDB: d5nria1, d5nrib1
    automated match to d4egqb2
    complexed with amp, dal, edo, mg, pge, so4

Details for d5nria2

PDB Entry: 5nri (more details), 1.5 Å

PDB Description: crystal structure of burkholderia pseudomallei d-alanine-d-alanine ligase in complex with amp and d-ala-d-ala
PDB Compounds: (A:) d-alanine--d-alanine ligase

SCOPe Domain Sequences for d5nria2:

Sequence; same for both SEQRES and ATOM records: (download)

>d5nria2 d.142.1.0 (A:103-312) automated matches {Burkholderia pseudomallei [TaxId: 320372]}

SCOPe Domain Coordinates for d5nria2:

Click to download the PDB-style file with coordinates for d5nria2.
(The format of our PDB-style files is described here.)

Timeline for d5nria2:

  • d5nria2 appears in periodic updates to SCOPe 2.07 starting on 2018-05-31

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