SCOPe 2.08: Domain d6fkjd2: 6fkj D:246-440

Lineage for d6fkjd2 (6fkj D:246-440)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.79: Bacillus chorismate mutase-like [55297] (9 superfamilies)
   core: beta-alpha-beta-alpha-beta(2); mixed beta-sheet: order: 1423, strand 4 is antiparallel to the rest

4. Superfamily d.79.2: Tubulin C-terminal domain-like [55307] (2 families)

5. Family d.79.2.1: Tubulin, C-terminal domain [55308] (4 proteins)

6. Protein automated matches [227071] (7 species)
   not a true protein

7. Species Cow (Bos taurus) [TaxId:9913] [226565] (136 PDB entries)

8. Domain d6fkjd2: 6fkj D:246-440 [350775]
   Other proteins in same PDB: d6fkja1, d6fkjb1, d6fkjc1, d6fkjd1, d6fkje_, d6fkjf1, d6fkjf2, d6fkjf3
   automated match to d3rycd2
   complexed with acp, ca, dlw, gdp, gol, gtp, mes, mg, pg4

Details for d6fkjd2

PDB Entry: 6fkj, 2.15 Å

PDB Description: tubulin-tub075 complex

PDB Compounds: (D:) Tubulin beta-2B chain

SCOPe Domain Sequences for d6fkjd2:

Sequence, based on SEQRES records:

>d6fkjd2 d.79.2.1 (D:246-440) automated matches {Cow (Bos taurus) [TaxId: 9913]}
gqlnadlrklavnmvpfprlhffmpgfapltsrgsqqyraltvpeltqqmfdsknmmaac
dprhgryltvaaifrgrmsmkevdeqmlnvqnknssyfvewipnnvktavcdipprglkm
satfignstaiqelfkriseqftamfrrkaflhwytgegmdemefteaesnmndlvseyq
qyqdata

Sequence, based on observed residues (ATOM records):

>d6fkjd2 d.79.2.1 (D:246-440) automated matches {Cow (Bos taurus) [TaxId: 9913]}
gqlnadlrklavnmvpfprlhffmpgfapltsrgsaltvpeltqqmfdsknmmaacdprh
gryltvaaifrgrmsmkevdeqmlnvqnknssyfvewipnnvktavcdipprglkmsatf
ignstaiqelfkriseqftamfrrkaflhwytgegmdemefteaesnmndlvseyqqyqd
ata

Timeline for d6fkjd2:

• d6fkjd2 first appeared in SCOPe 2.07