SCOP 1.65: Domain d2uaga3: 2uag A:94-297

Lineage for d2uaga3 (2uag A:94-297)

1. Root: SCOP 1.65

2. Class c: Alpha and beta proteins (a/b) [51349] (121 folds)

3. Fold c.72: Ribokinase-like [53612] (2 superfamilies)
   core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
   potential superfamily: members of this fold have similar functions but different ATP-binding sites

4. Superfamily c.72.2: MurD-like peptide ligases, catalytic domain [53623] (2 families)
   has extra strand located between strands 1 and 2

5. Family c.72.2.1: MurCDEF [53624] (4 proteins)

6. Protein UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD [53625] (1 species)

7. Species Escherichia coli [TaxId:562] [53626] (6 PDB entries)

8. Domain d2uaga3: 2uag A:94-297 [34954]
   Other proteins in same PDB: d2uaga1, d2uaga2
   complexed with adp, mg, uma

Details for d2uaga3

PDB Entry: 2uag, 1.7 Å

PDB Description: udp-n-acetylmuramoyl-l-alanine:d-glutamate ligase

SCOP Domain Sequences for d2uaga3:

Sequence, based on SEQRES records:

>d2uaga3 c.72.2.1 (A:94-297) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli}
dielfcreaqapivaitgsngkstvttlvgemakaagvnvgvggniglpalmllddecel
yvlelssfqlettsslqavaatilnvtedhmdrypfglqqyraaklriyenakvcvvnad
daltmpirgadercvsfgvnmgdyhlnhqqgetwlrvkgekvlnvkemklsgqhnytnal
aalaladaaglprasslkalttft

Sequence, based on observed residues (ATOM records):

>d2uaga3 c.72.2.1 (A:94-297) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli}
dielfcreaqapivaitgsngkstvttlvgemakaagvnvgvggniglpalmllddecel
yvlelssfqlettsslqavaatilnvtedhmdrypfglqqyraaklriyenakvcvvnad
daltmpercvsfgvnmgdyhlnhetwlrvkgekvlnvkemklsgqhnytnalaalalada
aglprasslkalttft

Timeline for d2uaga3:

• d2uaga3 first appeared (with stable ids) in SCOP 1.55
  
• d2uaga3 appears in SCOP 1.63
  
• d2uaga3 appears in SCOP 1.67
  
• d2uaga3 appears in the current release, SCOPe 2.08