Lineage for d6aoqa1 (6aoq A:11-325)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2370814Fold b.19: Viral protein domain [49817] (1 superfamily)
    sandwich; 9 strands in 2 sheets; jelly-roll; form trimers
  4. 2370815Superfamily b.19.1: Viral protein domain [49818] (4 families) (S)
    forms homotrimers
  5. 2370862Family b.19.1.2: Influenza hemagglutinin headpiece [49823] (2 proteins)
  6. 2370863Protein Hemagglutinin [49824] (16 species)
    includes rudiment esterase domain
  7. 2370919Species Influenza A virus, different strains [TaxId:11320] [49825] (125 PDB entries)
  8. 2371105Domain d6aoqa1: 6aoq A:11-325 [340236]
    Other proteins in same PDB: d6aoqa2, d6aoqb_
    automated match to d2yp5a1
    complexed with bma, man, nag

Details for d6aoqa1

PDB Entry: 6aoq (more details), 2.35 Å

PDB Description: crystal structure of the a/brisbane/10/2007 (h3n2) influenza virus hemagglutinin apo form
PDB Compounds: (A:) Hemagglutinin HA1 chain

SCOPe Domain Sequences for d6aoqa1:

Sequence; same for both SEQRES and ATOM records: (download)

>d6aoqa1 b.19.1.2 (A:11-325) Hemagglutinin {Influenza A virus, different strains [TaxId: 11320]}
atlclghhavpngtivktitndqievtnatelvqssstgeicdsphqildgenctlidal
lgdpqcdgfqnkkwdlfverskaysncypydvpdyaslrslvassgtlefnnesfnwtgv
tqngtssacirrsnnsffsrlnwlthlkfkypalnvtmpnnekfdklyiwgvhhpgtdnd
qiflyaqasgritvstkrsqqtvipnigsrprvrnipsrisiywtivkpgdillinstgn
liaprgyfkirsgkssimrsdapigkcnsecitpngsipndkpfqnvnritygacpryvk
qntlklatgmrnvpe

SCOPe Domain Coordinates for d6aoqa1:

Click to download the PDB-style file with coordinates for d6aoqa1.
(The format of our PDB-style files is described here.)

Timeline for d6aoqa1:

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Domains from same chain:
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d6aoqa2
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Domains from other chains:
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d6aoqb_