SCOPe 2.08: Domain d5y34c_: 5y34 C:

Lineage for d5y34c_ (5y34 C:)

1. Root: SCOPe 2.08

2. Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)

3. Fold e.18: HydB/Nqo4-like [56761] (1 superfamily)
   3 domains: (1) all-alpha; (2&3) alpha+beta

4. Superfamily e.18.1: HydB/Nqo4-like [56762] (3 families)

5. Family e.18.1.0: automated matches [191637] (1 protein)
   not a true family

6. Protein automated matches [191173] (18 species)
   not a true protein

7. Species Hydrogenovibrio marinus [TaxId:28885] [196125] (3 PDB entries)

8. Domain d5y34c_: 5y34 C: [338093]
   Other proteins in same PDB: d5y34b_, d5y34d_
   automated match to d3ayxa_
   complexed with 3ni, f3s, fco, gol, mg, o, sf3, sf4

Details for d5y34c_

PDB Entry: 5y34, 1.32 Å

PDB Description: membrane-bound respiratory [nife]-hydrogenase from hydrogenovibrio marinus in a ferricyanide-oxidized condition

PDB Compounds: (C:) hydrogenase

SCOPe Domain Sequences for d5y34c_:

Sequence; same for both SEQRES and ATOM records:

>d5y34c_ e.18.1.0 (C:) automated matches {Hydrogenovibrio marinus [TaxId: 28885]}
svlntpnhykmdnsgrrvvidpvtrieghmrcevnvdennviqnavstgtmwrglevilr
grdprdawafvericgvctgchalasvravedaldikiphnatlireimaktlqihdhiv
hfyhlhaldwvnpvnalkadpqatselqklvsphhpmsspgyfkdiqiriqkfvdsgqlg
ifkngywsnpayklspeadlmavthylealdfqkeivkihaifggknphpnymvggvpca
inidgdmaagapinmerlnfvkslieqgrtfntnvyvpdviaiaafyrdwlyggglsatn
vmdygaypktpydkstdqlpggaiingdwgkihpvdprdpeqvqefvthswykypdetkg
lhpwdgitepnyelgsktkgsrtniieidesakyswiksprwrghavevgplaryilaya
qgveyvktqvhtslnrfnavcrlldpnhkditdlkaflgstigrtlaraleseycgdmml
ddfnqlisnikngdsstantdkwdpsswpehakgvgtvaaprgalahwiviekgkiknyq
cvvpttwngsprdpkgnigafeaslmgtpmerpdepvevlrtlhsfdpclacsth

Timeline for d5y34c_:

• d5y34c_ first appeared in SCOPe 2.06
  
• d5y34c_ appears in SCOPe 2.07