Lineage for d1kspa1 (1ksp A:324-518)

  1. Root: SCOP 1.67
  2. 383641Class c: Alpha and beta proteins (a/b) [51349] (130 folds)
  3. 397315Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 397627Superfamily c.55.3: Ribonuclease H-like [53098] (9 families) (S)
    consists of one domain of this fold
  5. 397834Family c.55.3.5: DnaQ-like 3'-5' exonuclease [53118] (7 proteins)
  6. 397868Protein Exonuclease domain of prokaryotic DNA polymerase [53119] (3 species)
    part of Klenow fragment, KF
  7. 397895Species Escherichia coli [TaxId:562] [53120] (14 PDB entries)
  8. 397902Domain d1kspa1: 1ksp A:324-518 [33687]
    Other proteins in same PDB: d1kspa2
    protein/DNA complex; complexed with pst, zn; mutant

Details for d1kspa1

PDB Entry: 1ksp (more details), 2.3 Å

PDB Description: DNA polymerase I Klenow fragment (E.C.2.7.7.7) mutant/DNA complex

SCOP Domain Sequences for d1kspa1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1kspa1 c.55.3.5 (A:324-518) Exonuclease domain of prokaryotic DNA polymerase {Escherichia coli}
misydnyvtildeetlkawiaklekapvfafdtetdsldnisanlvglsfaiepgvaayi
pvahdyldapdqisreralellkplledekalkvgqnlkydrgilanygielrgiafdtm
lesyilnsvagrhdmdslaerwlkhktitfeeiagkgknqltfnqialeeagryaaedad
vtlqlhlkmwpdlqk

SCOP Domain Coordinates for d1kspa1:

Click to download the PDB-style file with coordinates for d1kspa1.
(The format of our PDB-style files is described here.)

Timeline for d1kspa1:

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Domains from same chain:
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d1kspa2