SCOP 1.65: Domain d1dfmb_: 1dfm B:

Lineage for d1dfmb_ (1dfm B:)

1. Root: SCOP 1.65

2. Class c: Alpha and beta proteins (a/b) [51349] (121 folds)

3. Fold c.52: Restriction endonuclease-like [52979] (3 superfamilies)
   core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest

4. Superfamily c.52.1: Restriction endonuclease-like [52980] (20 families)

5. Family c.52.1.5: Restriction endonuclease BglII [52993] (1 protein)

6. Protein Restriction endonuclease BglII [52994] (1 species)

7. Species Bacillus subtilis [TaxId:1423] [52995] (3 PDB entries)

8. Domain d1dfmb_: 1dfm B: [33296]

Details for d1dfmb_

PDB Entry: 1dfm, 1.5 Å

PDB Description: crystal structure of restriction endonuclease bglii complexed with dna 16-mer

SCOP Domain Sequences for d1dfmb_:

Sequence, based on SEQRES records:

>d1dfmb_ c.52.1.5 (B:) Restriction endonuclease BglII {Bacillus subtilis}
mkiditdynhadeilnpqlwkeieetllkmplhvkasdqaskvgslifdpvgtnqyikde
lvpkhwknnipipkrfdflgtdidfgkrdtlvevqfsnypfllnntvrselfhksnmdid
eegmkvaiiitkghmfpasnsslyyeqaqnqlnslaeynvfdvpirlvgliedfetdidi
vsttyadkrysrtitkrdtvkgkvidtntpntrrrkrgtivty

Sequence, based on observed residues (ATOM records):

>d1dfmb_ c.52.1.5 (B:) Restriction endonuclease BglII {Bacillus subtilis}
mkiditdynhadeilnpqlwkeieetllkmplhvkasdqaskvgslifdpvgtnqyikde
lvpkhwknnipipkrfdflgtdidfgkrdtlvevqfsnypfllnntvrselfhksnmdid
eegmkvaiiitkghmfpasnsslyyeqaqnqlnslaeynvfdvpirlvgliedfetdidi
vsttyadkrysrtitkrdtvkgkvidtntrkrgtivty

Timeline for d1dfmb_:

• d1dfmb_ first appeared (with stable ids) in SCOP 1.55
  
• d1dfmb_ appears in SCOP 1.63
  
• d1dfmb_ appears in SCOP 1.67
  
• d1dfmb_ appears in the current release, SCOPe 2.08