SCOP 1.63: Domain d1rv5b_: 1rv5 B:

Lineage for d1rv5b_ (1rv5 B:)

1. Root: SCOP 1.63

2. Class c: Alpha and beta proteins (a/b) [51349] (117 folds)

3. Fold c.52: Restriction endonuclease-like [52979] (3 superfamilies)
   core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest

4. Superfamily c.52.1: Restriction endonuclease-like [52980] (19 families)

5. Family c.52.1.2: Restriction endonuclease EcoRV [52984] (1 protein)

6. Protein Restriction endonuclease EcoRV [52985] (1 species)

7. Species Escherichia coli [TaxId:562] [52986] (23 PDB entries)

8. Domain d1rv5b_: 1rv5 B: [33263]
   protein/DNA complex

Details for d1rv5b_

PDB Entry: 1rv5, 2.1 Å

PDB Description: complex of ecorv endonuclease with d(aaagat)/d(atctt)

SCOP Domain Sequences for d1rv5b_:

Sequence, based on SEQRES records:

>d1rv5b_ c.52.1.2 (B:) Restriction endonuclease EcoRV {Escherichia coli}
slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgy
iveepkqqnhypdftlykpsepnkkiaidikttytnkenekikftlggytsfirnntkni
vypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdla
gsgnttnigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiy
rgrk

Sequence, based on observed residues (ATOM records):

>d1rv5b_ c.52.1.2 (B:) Restriction endonuclease EcoRV {Escherichia coli}
slrsdlinaldvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkq
qnhypdftlykpsepnkkiaidikttytnkikftlggytsfirnntknivypfdqyiahw
iigyvytrvlktyninelneipkpykgvkvflqdkwviagdlagsgnttnigsihahykd
fvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk

Timeline for d1rv5b_:

• d1rv5b_ first appeared (with stable ids) in SCOP 1.55
  
• d1rv5b_ appears in SCOP 1.61
  
• d1rv5b_ appears in SCOP 1.65
  
• d1rv5b_ appears in the current release, SCOPe 2.08