SCOPe 2.06: Domain d5k32b1: 5k32 B:88-411

Lineage for d5k32b1 (5k32 B:88-411)

1. Root: SCOPe 2.06

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.211: HD-domain/PDEase-like [109603] (1 superfamily)
   multihelical; consists of two different alpha-helical bundles

4. Superfamily a.211.1: HD-domain/PDEase-like [109604] (6 families)

5. Family a.211.1.2: PDEase [48548] (7 proteins)
   Pfam PF00233; multihelical; can be divided into three subdomains

6. Protein Catalytic domain of cyclic nucleotide phosphodiesterase pde4d [89151] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [89152] (39 PDB entries)
   Uniprot Q08499 388-713

8. Domain d5k32b1: 5k32 B:88-411 [332409]
   Other proteins in same PDB: d5k32b2
   automated match to d2qynb_
   complexed with 6q2, edo, mg, zn

Details for d5k32b1

PDB Entry: 5k32, 1.99 Å

PDB Description: pde4d crystal structure in complex with small molecule inhibitor

PDB Compounds: (B:) cAMP-specific 3',5'-cyclic phosphodiesterase 4D

SCOPe Domain Sequences for d5k32b1:

Sequence, based on SEQRES records:

>d5k32b1 a.211.1.2 (B:88-411) Catalytic domain of cyclic nucleotide phosphodiesterase pde4d {Human (Homo sapiens) [TaxId: 9606]}
qedvlakeledvnkwglhvfriaelsgnrpltvimhtifqerdllktfkipvdtlitylm
tledhyhadvayhnnihaadvvqsthvllstpaleavftdleilaaifasaihdvdhpgv
snqflintnselalmyndssvlenhhlavgfkllqeencdifqnltkkqrqslrkmvidi
vlatdmskhmnlladlktmvetkkvtssgvllldnysdriqvlqnmvhcadlsnptkplq
lyrqwtdrimeeffrqgdrerergmeispmcdkhnasveksqvgfidyivhplwetwadl
vhpdaqdildtlednrewyqstip

Sequence, based on observed residues (ATOM records):

>d5k32b1 a.211.1.2 (B:88-411) Catalytic domain of cyclic nucleotide phosphodiesterase pde4d {Human (Homo sapiens) [TaxId: 9606]}
qedvlakeledvnkwglhvfriaelsgnrpltvimhtifqerdllktfkipvdtlitylm
tledhyhadvayhnnihaadvvqsthvllstpaleavftdleilaaifasaihdvdhpgv
snqflintnselalmyndssvlenhhlavgfkllqeencdifqnltkkqrqslrkmvidi
vlatdmskhmnlladlktmvetkkvtsvllldnysdriqvlqnmvhcadlsnptkplqly
rqwtdrimeeffrqgdrerergmeiscdkhnasveksqvgfidyivhplwetwadlvhpd
aqdildtlednrewyqstip

Timeline for d5k32b1:

• d5k32b1 is new in SCOPe 2.06-stable
  
• d5k32b1 appears in SCOPe 2.07
  
• d5k32b1 appears in the current release, SCOPe 2.08