SCOPe 2.07: Domain d5c41a1: 5c41 A:14-322

Lineage for d5c41a1 (5c41 A:14-322)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.72: Ribokinase-like [53612] (3 superfamilies)
   core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
   potential superfamily: members of this fold have similar functions but different ATP-binding sites

4. Superfamily c.72.1: Ribokinase-like [53613] (6 families)
   has extra strand located between strands 2 and 3

5. Family c.72.1.1: Ribokinase-like [53614] (10 proteins)
   automatically mapped to Pfam PF00294

6. Protein Ribokinase [53615] (3 species)

7. Species Human (Homo sapiens) [TaxId:9606] [142709] (11 PDB entries)
   Uniprot Q9H477 15-322

8. Domain d5c41a1: 5c41 A:14-322 [318446]
   Other proteins in same PDB: d5c41a2, d5c41b2, d5c41c2, d5c41d2
   automated match to d2fv7a1
   complexed with acp, na, po4

Details for d5c41a1

PDB Entry: 5c41, 1.95 Å

PDB Description: crystal structure of human ribokinase in complex with amppcp in p21 spacegroup and with 4 protomers

PDB Compounds: (A:) ribokinase

SCOPe Domain Sequences for d5c41a1:

Sequence; same for both SEQRES and ATOM records:

>d5c41a1 c.72.1.1 (A:14-322) Ribokinase {Human (Homo sapiens) [TaxId: 9606]}
evaavvvvgscmtdlvsltsrlpktgetihghkffigfggkganqcvqaarlgamtsmvc
kvgkdsfgndyienlkqndisteftyqtkdaatgtasiivnnegqniivivaganlllnt
edlraaanvisrakvmvcqleitpatslealtmarrsgvktlfnpapaiadldpqfytls
dvfccneseaeiltgltvgsaadageaalvllkrgcqvviitlgaegcvvlsqtepepkh
iptekvkavdttgagdsfvgalafylayypnlsledmlnrsnfiaavsvqaagtqssypy
kkdlpltlf

Timeline for d5c41a1:

• d5c41a1 first appeared in SCOPe 2.06
  
• d5c41a1 appears in the current release, SCOPe 2.08