SCOPe 2.07: Domain d1qnfa2: 1qnf A:1-204

Lineage for d1qnfa2 (1qnf A:1-204)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.28: Cryptochrome/photolyase, N-terminal domain [52424] (1 superfamily)
   3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32145; Rossmann-like

4. Superfamily c.28.1: Cryptochrome/photolyase, N-terminal domain [52425] (2 families)
   automatically mapped to Pfam PF00875

5. Family c.28.1.1: Cryptochrome/photolyase, N-terminal domain [52426] (3 proteins)

6. Protein DNA photolyase [52427] (3 species)
   binds a light-harvesting cofactor

7. Species Synechococcus elongatus [TaxId:32046] [52429] (7 PDB entries)
   Uniprot P05327 1-474
   cofactor is HDF

8. Domain d1qnfa2: 1qnf A:1-204 [31632]
   Other proteins in same PDB: d1qnfa1
   complexed with fad, hdf

Details for d1qnfa2

PDB Entry: 1qnf, 1.8 Å

PDB Description: structure of photolyase

PDB Compounds: (A:) photolyase

SCOPe Domain Sequences for d1qnfa2:

Sequence; same for both SEQRES and ATOM records:

>d1qnfa2 c.28.1.1 (A:1-204) DNA photolyase {Synechococcus elongatus [TaxId: 32046]}
maapilfwhrrdlrlsdniglaaaraqsaqliglfcldpqilqsadmaparvaylqgclq
elqqryqqagsrllllqgdpqhlipqlaqqlqaeavywnqdiepygrdrdgqvaaalkta
giravqlwdqllhspdqilsgsgnpysvygpfwknwqaqpkptpvatptelvdlspeqlt
aiaplllselptlkqlgfdwdggf

Timeline for d1qnfa2:

• d1qnfa2 first appeared (with stable ids) in SCOP 1.55, called d1qnf_2
  
• d1qnfa2 appears in SCOPe 2.06
  
• d1qnfa2 appears in the current release, SCOPe 2.08