SCOPe 2.08: Domain d4ygbc_: 4ygb C:

Lineage for d4ygbc_ (4ygb C:)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
   sandwich; 12-14 strands in 2 sheets; complex topology

4. Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (27 families)

5. Family b.29.1.13: Lectin leg-like [74904] (4 proteins)
   mammalian protein related to legume lectins
   automatically mapped to Pfam PF03388

6. Protein automated matches [190462] (2 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [197238] (11 PDB entries)

8. Domain d4ygbc_: 4ygb C: [311979]
   automated match to d4gkya_
   complexed with ca, gol

Details for d4ygbc_

PDB Entry: 4ygb, 1.6 Å

PDB Description: crystal structure of ergic-53/mcfd2, monoclinic calcium-free form

PDB Compounds: (C:) Protein ERGIC-53

SCOPe Domain Sequences for d4ygbc_:

Sequence, based on SEQRES records:

>d4ygbc_ b.29.1.13 (C:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
phrrfeykysfkgphlvqsdgtvpfwahagnaipssdqirvapslksqrgsvwtktkaaf
enwevevtfrvtgrgrigadglaiwyaenqglegpvfgsadlwngvgiffdsfdndgkkn
npaiviignngqihydhqndgasqalascqrdfrnkpypvrakityyqntltvminngft
pdkndyefcakvenmiipaqghfgisaatggladdhdvlsfltfqlt

Sequence, based on observed residues (ATOM records):

>d4ygbc_ b.29.1.13 (C:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
phrrfeykysfkgphlvqsdgtvpfwahagnaipssdqirvapslksqrgsvwtktkaaf
enwevevtfrvtgrgrigadglaiwyaewngvgiffdsfnpaiviignqalascqrdfrn
kpypvrakityyqntltvminngftpdkndyefcakvenmiipaqghfgisaatggladd
hdvlsfltfqlt

Timeline for d4ygbc_:

• d4ygbc_ first appeared in SCOPe 2.06
  
• d4ygbc_ appears in SCOPe 2.07