Lineage for d4n5sa1 (4n5s A:290-422)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2122050Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 2123751Superfamily c.55.3: Ribonuclease H-like [53098] (15 families) (S)
    consists of one domain of this fold
  5. 2124334Family c.55.3.5: DnaQ-like 3'-5' exonuclease [53118] (17 protein domains)
    contains Pfam PF00929
  6. 2124525Protein Exonuclease domain of prokaryotic DNA polymerase [53119] (3 species)
    part of Klenow fragment, KF
  7. 2124590Species Thermus aquaticus [TaxId:271] [53121] (29 PDB entries)
  8. 2124594Domain d4n5sa1: 4n5s A:290-422 [307751]
    Other proteins in same PDB: d4n5sa2
    automated match to d1bgxt3
    protein/DNA complex; complexed with act, dct, epe, gol, mg, mn; mutant

Details for d4n5sa1

PDB Entry: 4n5s (more details), 1.67 Å

PDB Description: Ternary complex structure of Klenow fragment of Taq DNA polymerase I707L mutant (Cs3C KlenTaq) with DNA and ddCTP
PDB Compounds: (A:) DNA polymerase I, thermostable

SCOPe Domain Sequences for d4n5sa1:

Sequence; same for both SEQRES and ATOM records: (download)

>d4n5sa1 c.55.3.5 (A:290-422) Exonuclease domain of prokaryotic DNA polymerase {Thermus aquaticus [TaxId: 271]}

SCOPe Domain Coordinates for d4n5sa1:

Click to download the PDB-style file with coordinates for d4n5sa1.
(The format of our PDB-style files is described here.)

Timeline for d4n5sa1:

  • d4n5sa1 is new in SCOPe 2.06-stable