SCOPe 2.08: Domain d1cm5b_: 1cm5 B:

Lineage for d1cm5b_ (1cm5 B:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.7: PFL-like glycyl radical enzymes [51997] (1 superfamily)
   contains: barrel, closed; n=10, S=10; accommodates a hairpin loop inside the barrel

4. Superfamily c.7.1: PFL-like glycyl radical enzymes [51998] (6 families)
   duplication: the N- and C-terminal halves have similar topologies

5. Family c.7.1.1: PFL-like [51999] (2 proteins)
   Pfam PF02901; except the C-terminal ~100 residues covered by Pfam PF01228

6. Protein Pyruvate formate-lyase, PFL [52000] (1 species)

7. Species Escherichia coli [TaxId:562] [52001] (8 PDB entries)

8. Domain d1cm5b_: 1cm5 B: [30672]
   complexed with co3, na; mutant

Details for d1cm5b_

PDB Entry: 1cm5, 2.3 Å

PDB Description: crystal structure of c418a,c419a mutant of pfl from e.coli

PDB Compounds: (B:) protein (pyruvate formate-lyase)

SCOPe Domain Sequences for d1cm5b_:

Sequence; same for both SEQRES and ATOM records:

>d1cm5b_ c.7.1.1 (B:) Pyruvate formate-lyase, PFL {Escherichia coli [TaxId: 562]}
selneklatawegftkgdwqnevnvrdfiqknytpyegdesflagateatttlwdkvmeg
vklenrthapvdfdtavastitshdagyinkqlekivglqteaplkralipfggikmieg
sckaynreldpmikkifteyrkthnqgvfdvytpdilrcrksgvltglpdaygrgriigd
yrrvalygidylmkdklaqftslqadlengvnleqtirlreeiaeqhralgqmkemaaky
gydisgpatnaqeaiqwtyfgylaavksqngaamsfgrtstfldvyierdlkagkiteqe
aqemvdhlvmklrmvrflrtpeydelfsgdpiwatesiggmgldgrtlvtknsfrflntl
ytmgpspepnmtilwseklplnfkkfaakvsidtsslqyenddlmrpdfnnddyaiaaav
spmivgkqmqffgaranlaktmlyainggvdeklkmqvgpksepikgdvlnydevmermd
hfmdwlakqyitalniihymhdkysyeaslmalhdrdvirtmacgiaglsvaadslsaik
yakvkpirdedglaidfeiegeypqfgnndprvddlavdlverfmkkiqklhtyrdaipt
qsvltitsnvvygkktgntpdgrragapfgpganpmhgrdqkgavasltsvaklpfayak
dgisytfsivpnalgkddevrktnlaglmdgyfhheasieggqhlnvnvmnremlldame
npekypqltirvsgyavrfnsltkeqqqdvitrtftqsm

Timeline for d1cm5b_:

• d1cm5b_ first appeared (with stable ids) in SCOP 1.55
  
• d1cm5b_ appears in SCOPe 2.07