Lineage for d4ywbc2 (4ywb C:260-622)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2143071Fold c.91: PEP carboxykinase-like [53794] (1 superfamily)
    contains a P-loop NTP-binding motif; mixed beta-sheet folds into a barrel-like structure with helices packed on one side
  4. 2143072Superfamily c.91.1: PEP carboxykinase-like [53795] (3 families) (S)
  5. 2143073Family c.91.1.1: PEP carboxykinase C-terminal domain [53796] (3 protein domains)
  6. 2143074Protein Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) [69612] (2 species)
  7. 2143084Species Norway rat (Rattus norvegicus) [TaxId:10116] [225316] (40 PDB entries)
  8. 2143109Domain d4ywbc2: 4ywb C:260-622 [277414]
    Other proteins in same PDB: d4ywba1, d4ywbc1
    automated match to d3dtba2
    complexed with 1wd, cl, mn, na, oxd

Details for d4ywbc2

PDB Entry: 4ywb (more details), 1.5 Å

PDB Description: structure of rat cytosolic pepck in complex with 3-mercaptopicolinic acid and oxalic acid
PDB Compounds: (C:) Phosphoenolpyruvate carboxykinase, cytosolic [GTP]

SCOPe Domain Sequences for d4ywbc2:

Sequence, based on SEQRES records: (download)

>d4ywbc2 c.91.1.1 (C:260-622) Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) {Norway rat (Rattus norvegicus) [TaxId: 10116]}
wlaehmlilgitnpegkkkylaaafpsacgktnlammnptlpgwkvecvgddiawmkfda
qgnlrainpengffgvapgtsvktnpnaiktiqkntiftnvaetsdggvywegideplap
gvtitswknkewrpqdeepcahpnsrfctpasqcpiidpawespegvpiegiifggrrpa
gvplvyealswqhgvfvgaamrseataaaehkgkvimhdpfamrpffgynfgkylahwls
mahrpaaklpkifhvnwfrkdkngkflwpgfgensrvlewmfgriegedsakltpigyvp
kedalnlkglgdvnveelfgiskefwekeveeidkyledqvnadlpyeierelralkqri
sqm

Sequence, based on observed residues (ATOM records): (download)

>d4ywbc2 c.91.1.1 (C:260-622) Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) {Norway rat (Rattus norvegicus) [TaxId: 10116]}
wlaehmlilgitnpegkkkylaaafpsacgktnlammnptlpgwkvecvgddiawmkfda
qgnlrainpengffgvapgtsvktnpnaiktiqkntiftnvaetsdggvywegideplap
gvtitswknkewrpdeepcahpnsrfctpasqcpiidpawespegvpiegiifggrrpag
vplvyealswqhgvfvgaamrseatkvimhdpfamrpffgynfgkylahwlsmahrpaak
lpkifhvnwfrkdkngkflwpgfgensrvlewmfgriegedsakltpigyvpkedalnlk
glgdvnveelfgiskefwekeveeidkyledqvnadlpyeierelralkqrisqm

SCOPe Domain Coordinates for d4ywbc2:

Click to download the PDB-style file with coordinates for d4ywbc2.
(The format of our PDB-style files is described here.)

Timeline for d4ywbc2:

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Domains from same chain:
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d4ywbc1