SCOPe 2.07: Domain d4yv2b_: 4yv2 B:

Lineage for d4yv2b_ (4yv2 B:)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.66: S-adenosyl-L-methionine-dependent methyltransferases [53334] (1 superfamily)
   core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest

4. Superfamily c.66.1: S-adenosyl-L-methionine-dependent methyltransferases [53335] (60 families)

5. Family c.66.1.0: automated matches [191451] (1 protein)
   not a true family

6. Protein automated matches [190689] (81 species)
   not a true protein

7. Species Trypanosoma cruzi [TaxId:353153] [188400] (13 PDB entries)

8. Domain d4yv2b_: 4yv2 B: [277045]
   automated match to d2o06a_
   complexed with 4k3, s4m

Details for d4yv2b_

PDB Entry: 4yv2, 2.17 Å

PDB Description: crystal structure of trypanosoma cruzi spermidine synthase in complex with 2-phenyl-1,2-thiazol-3(2h)-one

PDB Compounds: (B:) Spermidine synthase, putative

SCOPe Domain Sequences for d4yv2b_:

Sequence, based on SEQRES records:

>d4yv2b_ c.66.1.0 (B:) automated matches {Trypanosoma cruzi [TaxId: 353153]}
gwfreendqwpgqamslrvekvlydaptkfqhltifesdpkgpwgtvmaldgciqvtdyd
efvyhevlghtslcshpkpervliigggdggvlrevlrhgtvehcdlvdidgevmeqskq
hfpqisrsladpratvrvgdglafvrqtpdntydvviidttdpagpasklfgeafykdvl
rilkpdgiccnqgesiwldleliekmsrfiretgfasvqyalmhvptypcgsigtlvcsk
kagvdvtkplrpvedmpfakdlkyydsemhkasfalprfarhinn

Sequence, based on observed residues (ATOM records):

>d4yv2b_ c.66.1.0 (B:) automated matches {Trypanosoma cruzi [TaxId: 353153]}
gwfreendqwpgqamslrvekvlydaptkfqhltifesdpkgpwgtvmaldgciqvtdyd
efvyhevlghtslcshpkpervliigggdggvlrevlrhgtvehcdlvdidgevmeqskq
hfpqisrsladpratvrvgdglafvrqtpdntydvviidteafykdvlrilkpdgiccnq
gesiwldleliekmsrfiretgfasvqyalmhvptypcgsigtlvcskkagvdvtkplrp
vedmpfakdlkyydsemhkasfalprfarhinn

Timeline for d4yv2b_:

• d4yv2b_ first appeared in SCOPe 2.05
  
• d4yv2b_ appears in SCOPe 2.06
  
• d4yv2b_ appears in the current release, SCOPe 2.08