SCOPe 2.08: Domain d5bpaa_: 5bpa A:

Lineage for d5bpaa_ (5bpa A:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.92: Zincin-like [55485] (2 superfamilies)
   contains mixed beta sheet with connection over free side of the sheet

4. Superfamily d.92.1: Metalloproteases ('zincins'), catalytic domain [55486] (18 families)

5. Family d.92.1.11: Matrix metalloproteases, catalytic domain [55528] (14 proteins)

6. Protein Collagenase-3 (MMP-13) [55540] (2 species)

7. Species Human (Homo sapiens) [TaxId:9606] [55541] (47 PDB entries)

8. Domain d5bpaa_: 5bpa A: [273863]
   automated match to d1euba_
   complexed with 4uf, ca, zn

Details for d5bpaa_

PDB Entry: 5bpa, 1.79 Å

PDB Description: x-ray co-structure of mmp-13 with 4-[({5-[2-(ethoxycarbonyl)-1h-indol- 5-yl]-1-methyl-1h-pyrazol-3-yl}formamido)methyl]benzoate

PDB Compounds: (A:) collagenase 3

SCOPe Domain Sequences for d5bpaa_:

Sequence; same for both SEQRES and ATOM records:

>d5bpaa_ d.92.1.11 (A:) Collagenase-3 (MMP-13) {Human (Homo sapiens) [TaxId: 9606]}
ynvfprtlkwskmnltyrivnytpdmthsevekafkkafkvwsdvtplnftrlhdgiadi
misfgikehgdfypfdgpsgllahafppgpnyggdahfdddetwtssskgynlflvaahe
fghslgldhskdpgalmfpiytytgkshfmlpdddvqgiqslygpgded

Timeline for d5bpaa_:

• d5bpaa_ first appeared in SCOPe 2.05
  
• d5bpaa_ appears in SCOPe 2.07