SCOPe 2.07: Domain d4rr3b_: 4rr3 B:

Lineage for d4rr3b_ (4rr3 B:)

1. Root: SCOPe 2.07

2. Class b: All beta proteins [48724] (178 folds)

3. Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
   sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
   characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies

4. Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families)

5. Family b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) [88634] (10 proteins)
   the order of the chains N-VP0-VP3-VP1-C is as in the polyprotein; VP0 is cleaved later upon capsid assembly to VP4 and VP2
   there is a different order in the shuffled genome of insect picorna-like proteins (Cricket paralysis virus)

6. Protein automated matches [190854] (25 species)
   not a true protein

7. Species Human enterovirus 71 [TaxId:39054] [195913] (16 PDB entries)

8. Domain d4rr3b_: 4rr3 B: [267406]
   automated match to d3vbhc_

Details for d4rr3b_

PDB Entry: 4rr3, 3.1 Å

PDB Description: crystal structure of a recombinant ev71 virus particle

PDB Compounds: (B:) capsid protein vp3

SCOPe Domain Sequences for d4rr3b_:

Sequence, based on SEQRES records:

>d4rr3b_ b.121.4.1 (B:) automated matches {Human enterovirus 71 [TaxId: 39054]}
gfptelkpgtnqflttddgvsapilpnfhptpcihipgevrnllelcqvetilevnnvpt
natslmerlrfpvsaqagkgelcavfradpgrsgpwqstllgqlcgyytqwsgslevtfm
ftgsfmatgkmliaytppggplpkdratamlgthviwdfglqssvtlvipwisnthyrah
ardgvfdyyttglvsiwyqtnyvvpigapntayiialaaaqknftmqlckdasdilqtgt

Sequence, based on observed residues (ATOM records):

>d4rr3b_ b.121.4.1 (B:) automated matches {Human enterovirus 71 [TaxId: 39054]}
gfptelkpgtnqflttddgvsapilpnfhptpcihipgevrnllelcqvetilevnnvpt
natslmerlrfpvsaqagkgelcavfradpgrsgpwqstllgqlcgyytqwsgslevtfm
ftgsfmatgkmliaytppggplpkdratamlgthviwdfglqssvtlvipwisnthyryt
tglvsiwyqtnyvvpigapntayiialaaaqknftmqlckdasdilqtgt

Timeline for d4rr3b_:

• d4rr3b_ first appeared in SCOPe 2.05
  
• d4rr3b_ appears in SCOPe 2.06
  
• d4rr3b_ appears in the current release, SCOPe 2.08