SCOPe 2.05: Domain d4upes_: 4upe S:

Lineage for d4upes_ (4upe S:)

1. Root: SCOPe 2.05

2. Class e: Multi-domain proteins (alpha and beta) [56572] (68 folds)

3. Fold e.18: HydB/Nqo4-like [56761] (1 superfamily)
   3 domains: (1) all-alpha; (2&3) alpha+beta

4. Superfamily e.18.1: HydB/Nqo4-like [56762] (3 families)

5. Family e.18.1.1: Nickel-iron hydrogenase, large subunit [56763] (2 proteins)

6. Protein automated matches [190109] (8 species)
   not a true protein

7. Species Desulfovibrio fructosovorans [TaxId:878] [188150] (12 PDB entries)

8. Domain d4upes_: 4upe S: [263990]
   Other proteins in same PDB: d4upea_, d4upeb_, d4upec_
   automated match to d1yrqh_
   complexed with ca, f3s, fco, gol, mes, ni, po4, sf4; mutant

Details for d4upes_

PDB Entry: 4upe, 1.8 Å

PDB Description: structure of the unready ni-a state of the s499c mutant of d. fructosovorans nife-hydrogenase

PDB Compounds: (S:) Nickel-dependent hydrogenase large subunit

SCOPe Domain Sequences for d4upes_:

Sequence; same for both SEQRES and ATOM records:

>d4upes_ e.18.1.1 (S:) automated matches {Desulfovibrio fructosovorans [TaxId: 878]}
ptpqstftgpivvdpitrieghlrimvevengkvkdawsssqlfrgleiilkgrdprdaq
hftqracgvctyvhalassrcvddavkvsipanarmmrnlvmasqylhdhlvhfyhlhal
dwvdvtaalkadpnkaaklaasiaparpgnsakalkavqdklkafvesgqlgiftnayfl
gghkayylppevdliatahylealhmqvkaasamailggknphtqftvvggcsnyqgltk
dplanylalskevcqfvnecyipdllavagfykdwggiggtsnylafgefatddsspekh
latsqfpsgvitgrdlgkvdnvdlgaiyedvkyswyapggdgkhpydgvtdpkytklddk
dhyswmkaprykgkamevgplartfiayakgqpdfkkvvdmvlgklsvpatalhstlgrt
aargietaivcanmekwikemadsgakdntlcakwempeeskgvgladaprgalshwiri
kgkkidnfqlvvpctwnlgprgaqgdkspveealigtpiadpkrpveilrtvhafdpcia
cgvh

Timeline for d4upes_:

• d4upes_ is new in SCOPe 2.05-stable
  
• d4upes_ appears in SCOPe 2.06
  
• d4upes_ appears in the current release, SCOPe 2.08