SCOPe 2.04: Domain d4gg1a3: 4gg1 A:342-526

Lineage for d4gg1a3 (4gg1 A:342-526)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.36: Thiamin diphosphate-binding fold (THDP-binding) [52517] (1 superfamily)
   3 layers: a/b/a; parallel beta-sheet of 6 strands, order 213465

4. Superfamily c.36.1: Thiamin diphosphate-binding fold (THDP-binding) [52518] (9 families)
   there are two different functional modules of this fold: pyridine-binding (Pyr) and pyrophosphate-binding (PP) modules
   two Pyr and two PP modules assemble together in a conserved heterotetrameric core that binds two THDP coenzyme molecules

5. Family c.36.1.0: automated matches [227300] (1 protein)
   not a true family
6. Protein automated matches [227126] (15 species)
   not a true protein
7. Species Pseudomonas putida [TaxId:303] [254984] (28 PDB entries)

8. Domain d4gg1a3: 4gg1 A:342-526 [252210]
   Other proteins in same PDB: d4gg1a2
   automated match to d1q6za3
   complexed with ca, gol, na, tzd; mutant

Details for d4gg1a3

PDB Entry: 4gg1, 1.07 Å

PDB Description: Crystal Structure of Benzoylformate Decarboxylase Mutant L403T

PDB Compounds: (A:) Benzoylformate decarboxylase

SCOPe Domain Sequences for d4gg1a3:

Sequence; same for both SEQRES and ATOM records:

>d4gg1a3 c.36.1.0 (A:342-526) automated matches {Pseudomonas putida [TaxId: 303]}
epakvdqdagrlhpetvfdtlndmapenaiylneststtaqmwqrlnmrnpgsyyfcaag
gtgfalpaaigvqlaeperqviavigdgsanysisalwtaaqyniptifvimnngtygal
rwfagvleaenvpgldvpgidfralakgygvqalkadnleqlkgslqealsakgpvliev
stvsp

Timeline for d4gg1a3:

• d4gg1a3 is new in SCOPe 2.04-stable
  
• d4gg1a3 appears in SCOPe 2.05
  
• d4gg1a3 appears in the current release, SCOPe 2.08