SCOPe 2.07: Domain d3hl2d_: 3hl2 D:

Lineage for d3hl2d_ (3hl2 D:)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
   main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest

4. Superfamily c.67.1: PLP-dependent transferases [53383] (10 families)

5. Family c.67.1.9: SepSecS-like [159704] (2 proteins)
   Pfam PF05889

6. Protein automated matches [254680] (1 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [255862] (4 PDB entries)

8. Domain d3hl2d_: 3hl2 D: [246503]
   automated match to d3bc8a1
   protein/RNA complex; complexed with plr, sep, ts6

Details for d3hl2d_

PDB Entry: 3hl2, 2.81 Å

PDB Description: the crystal structure of the human sepsecs-trnasec complex

PDB Compounds: (D:) O-phosphoseryl-tRNA(Sec) selenium transferase

SCOPe Domain Sequences for d3hl2d_:

Sequence; same for both SEQRES and ATOM records:

>d3hl2d_ c.67.1.9 (D:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
earrshehlirlllekgkcpengwdestlelflhelaimdsnnflgncgvgeregrvasa
lvarrhyrfihgigrsgdisavqpkaagssllnkitnslvldiiklagvhtvancfvvpm
atgmsltlcfltlrhkrpkakyiiwpridqkscfksmitagfepvvienvlegdelrtdl
kaveakvqelgpdcilcihsttscfaprvpdrleelavicanydiphivnnaygvqsskc
mhliqqgarvgridafvqsldknfmvpvggaiiagfndsfiqeiskmypgrasaspsldv
litllslgsngykkllkerkemfsylsnqikklseaynerllhtphnpislamtlktlde
hrdkavtqlgsmlftrqvsgarvvplgsmqtvsgytfrgfmshtnnypcaylnaasaigm
kmqdvdlfikrldrclkavrk

Timeline for d3hl2d_:

• d3hl2d_ first appeared in SCOPe 2.04
  
• d3hl2d_ appears in SCOPe 2.06
  
• d3hl2d_ appears in the current release, SCOPe 2.08