SCOP 1.69: Domain d1c0mc1: 1c0m C:217-270

Lineage for d1c0mc1 (1c0m C:217-270)

1. Root: SCOP 1.69

2. Class b: All beta proteins [48724] (144 folds)

3. Fold b.34: SH3-like barrel [50036] (15 superfamilies)
   barrel, partly opened; n*=4, S*=8; meander
   the last strand is interrupted by a turn of 3-10 helix

4. Superfamily b.34.7: DNA-binding domain of retroviral integrase [50122] (1 family)

5. Family b.34.7.1: DNA-binding domain of retroviral integrase [50123] (1 protein)

6. Protein DNA-binding domain of retroviral integrase [50124] (3 species)

7. Species Rous sarcoma virus (RSV, avian sarcoma virus) [50126] (2 PDB entries)

8. Domain d1c0mc1: 1c0m C:217-270 [24637]
   Other proteins in same PDB: d1c0ma2, d1c0mb2, d1c0mc2, d1c0md2

Details for d1c0mc1

PDB Entry: 1c0m, 2.53 Å

PDB Description: crystal structure of rsv two-domain integrase

SCOP Domain Sequences for d1c0mc1:

Sequence; same for both SEQRES and ATOM records:

>d1c0mc1 b.34.7.1 (C:217-270) DNA-binding domain of retroviral integrase {Rous sarcoma virus (RSV, avian sarcoma virus)}
vltegppvkirietgewekgwnvlvwgrgyaavknrdtdkviwvpsrkvkpdit

Timeline for d1c0mc1:

• d1c0mc1 first appeared (with stable ids) in SCOP 1.55
  
• d1c0mc1 appears in SCOP 1.67
  
• d1c0mc1 appears in SCOP 1.71
  
• d1c0mc1 appears in the current release, SCOPe 2.08