SCOPe 2.08: Domain d3foec_: 3foe C:

Lineage for d3foec_ (3foe C:)

1. Root: SCOPe 2.08

2. Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)

3. Fold e.78: DNA gyrase B, C-terminal domain-like [254116] (1 superfamily)
   2 domains: (1) toprim alpha/beta; (2) alpha+beta "tail" domain

4. Superfamily e.78.1: DNA gyrase B, C-terminal domain-like [254138] (1 family)
   Pfam PF00986; homologous to Type II DNA topoisomerase N-terminal half

5. Family e.78.1.1: DNA gyrase B, C-terminal domain [254182] (1 protein)

6. Protein DNA gyrase beta-prime domain [254406] (3 species)

7. Species Pneumococcus (Streptococcus pneumoniae) [TaxId:1313] [254843] (5 PDB entries)

8. Domain d3foec_: 3foe C: [246175]
   Other proteins in same PDB: d3foea_, d3foeb_
   protein/DNA complex; complexed with nfx

Details for d3foec_

PDB Entry: 3foe, 4 Å

PDB Description: Structural insight into the quinolone-DNA cleavage complex of type IIA topoisomerases

PDB Compounds: (C:) DNA topoisomerase 4 subunit B

SCOPe Domain Sequences for d3foec_:

Sequence, based on SEQRES records:

>d3foec_ e.78.1.1 (C:) DNA gyrase beta-prime domain {Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]}
tpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgkvintakakmadilkneei
ntmiytigagvgadfsiedanydkiiimtdadtdgahiqtllltffyrymrplveaghvy
ialpplykmskgkgkkeevayawtdgeleelrkqfgkgatlqrykglgemnadqlwettm
npetrtlirvtiedlaraerrvnvlmgdkveprrkwiedn

Sequence, based on observed residues (ATOM records):

>d3foec_ e.78.1.1 (C:) DNA gyrase beta-prime domain {Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]}
tpaqsknpaknelylvegdsaggsakqgrdrkfilplrvintakakmadilkneeintmi
ytigagvgkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykmskgkgk
keayawtdgeleelkgatlqrykglgemdqlwettmnpetrtlirvtiedlaraerrvnv
lmgdkveprrkwiedn

Timeline for d3foec_:

• d3foec_ first appeared in SCOPe 2.04
  
• d3foec_ appears in SCOPe 2.07