SCOPe 2.04: Domain d2yrxa2: 2yrx A:102-322

Lineage for d2yrxa2 (2yrx A:102-322)

1. Root: SCOPe 2.04

2. Class d: Alpha and beta proteins (a+b) [53931] (380 folds)

3. Fold d.142: ATP-grasp [56058] (2 superfamilies)
   Consists of two subdomains with different alpha+beta folds
   shares functional and structural similarities with the PIPK and protein kinase superfamilies

4. Superfamily d.142.1: Glutathione synthetase ATP-binding domain-like [56059] (10 families)

5. Family d.142.1.0: automated matches [227184] (1 protein)
   not a true family

6. Protein automated matches [226904] (25 species)
   not a true protein

7. Species Geobacillus kaustophilus [TaxId:1462] [255710] (4 PDB entries)

8. Domain d2yrxa2: 2yrx A:102-322 [244807]
   Other proteins in same PDB: d2yrxa1, d2yrxa3
   automated match to d1gsoa3
   complexed with amp, po4

Details for d2yrxa2

PDB Entry: 2yrx, 1.9 Å

PDB Description: Crystal structure of GAR synthetase from Geobacillus kaustophilus

PDB Compounds: (A:) Phosphoribosylglycinamide synthetase

SCOPe Domain Sequences for d2yrxa2:

Sequence, based on SEQRES records:

>d2yrxa2 d.142.1.0 (A:102-322) automated matches {Geobacillus kaustophilus [TaxId: 1462]}
skafakelmkkygiptadhaaftsyeeakayieqkgapivikadglaagkgvtvaqtvee
alaaakaalvdgqfgtagsqvvieeylegeefsfmafvngekvyplaiaqdhkraydgde
gpntggmgayspvpqisdemmdaaleailrpaakalaaegrpflgvlyaglmatangpkv
iefnarfgdpeaqvvlprlktdlveavlavmdgkelelewt

Sequence, based on observed residues (ATOM records):

>d2yrxa2 d.142.1.0 (A:102-322) automated matches {Geobacillus kaustophilus [TaxId: 1462]}
skafakelmkkygiptadhaaftsyeeakayieqkgapivikadgkgvtvaqtveealaa
akaalvdgqfgtagsqvvieeylegeefsfmafvngekvyplaiaqdhkraydgdegpnt
ggmgayspvpqisdemmdaaleailrpaakalaaegrpflgvlyaglmatangpkviefn
arfgdpeaqvvlprlktdlveavlavmdgkelelewt

Timeline for d2yrxa2:

• d2yrxa2 is new in SCOPe 2.04-stable
  
• d2yrxa2 appears in SCOPe 2.05
  
• d2yrxa2 appears in the current release, SCOPe 2.08