SCOPe 2.08: Domain d4gold_: 4gol D:

Lineage for d4gold_ (4gol D:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.66: S-adenosyl-L-methionine-dependent methyltransferases [53334] (1 superfamily)
   core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest

4. Superfamily c.66.1: S-adenosyl-L-methionine-dependent methyltransferases [53335] (61 families)

5. Family c.66.1.28: N6 adenine-specific DNA methylase, DAM [88788] (3 proteins)
   automatically mapped to Pfam PF02086

6. Protein automated matches [237125] (1 species)
   not a true protein

7. Species Escherichia coli K-12 [TaxId:83333] [237133] (5 PDB entries)

8. Domain d4gold_: 4gol D: [237146]
   automated match to d2ored_
   protein/DNA complex; complexed with sa8

Details for d4gold_

PDB Entry: 4gol, 2.57 Å

PDB Description: Crystal Structure of E. coli DNA Adenine Methyltransferase in Complex with Methylated Aza-SAM

PDB Compounds: (D:) DNA adenine methylase

SCOPe Domain Sequences for d4gold_:

Sequence, based on SEQRES records:

>d4gold_ c.66.1.28 (D:) automated matches {Escherichia coli K-12 [TaxId: 83333]}
knraflkwaggkypllddikrhlpkgeclvepfvgagsvflntdfsryiladinsdlisl
ynivkmrtdeyvqaarelfvpetncaevyyqfreefnksqdpfrravlflylnrygyngl
crynlrgefnvpfgrykkpyfpeaelyhfaekaqnaffycesyadsmaraddasvvycdp
pyaplsatanftayhtnsftleqqahlaeiaeglverhipvlisnhdtmltrewyqrakl
hvvkvrrsissnggtrkkvdellalykp

Sequence, based on observed residues (ATOM records):

>d4gold_ c.66.1.28 (D:) automated matches {Escherichia coli K-12 [TaxId: 83333]}
knraflkwaggkypllddikrhlpkgeclvepfvgagsvflntdfsryiladinsdlisl
ynivkmrtdeyvqaarelfvpetncaevyyqfreefnksqdpfrravlflylnrygyngl
crynlrgefnvpfgrykkpyfpeaelyhfaekaqnaffycesyadsmaraddasvvycdp
pyaplnsftleqqahlaeiaeglverhipvlisnhdtmltrewyqraklhvvkvdellal
ykp

Timeline for d4gold_:

• d4gold_ first appeared in SCOPe 2.03
  
• d4gold_ appears in SCOPe 2.07