SCOPe 2.08: Domain d4m1ra_: 4m1r A:

Lineage for d4m1ra_ (4m1r A:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.3: beta-glycanases [51487] (27 proteins)
   consist of a number of sequence families

6. Protein automated matches [190057] (28 species)
   not a true protein

7. Species Soil metagenome [TaxId:410658] [236610] (2 PDB entries)

8. Domain d4m1ra_: 4m1r A: [236612]
   automated match to d1egza_
   complexed with trs

Details for d4m1ra_

PDB Entry: 4m1r, 1.8 Å

PDB Description: Structure of a novel cellulase 5 from a sugarcane soil metagenomic library

PDB Compounds: (A:) Cellulase 5

SCOPe Domain Sequences for d4m1ra_:

Sequence; same for both SEQRES and ATOM records:

>d4m1ra_ c.1.8.3 (A:) automated matches {Soil metagenome [TaxId: 410658]}
mvapittsgnkvlfggqqgsiagnsffwsntgwggekyynaqtvawlksdwksslvraam
gvdesggyitdsynktrvttvvdaaiannmyviidwhshhaeqyqsqaiaffkematkyg
nnnnviyeiyneplqvswssvikpyataviaeirkidpdnlivvgtptwsqdvdvaandp
itgyaniaytlhfyagthgqslrnkastalskgiplfvtewgsvnadgggsvataetnsw
vsfmktnnisnanwalndkaegasalvsgasanggwtssqltasgtlaksiisgwp

Timeline for d4m1ra_:

• d4m1ra_ first appeared in SCOPe 2.03
  
• d4m1ra_ appears in SCOPe 2.07