SCOPe 2.03: Domain d3sq3a2: 3sq3 A:294-540

Lineage for d3sq3a2 (3sq3 A:294-540)

1. Root: SCOPe 2.03

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.136: Phospholipase D/nuclease [56023] (1 superfamily)
   beta-alpha-beta-alpha-beta-alpha-beta(4)-alpha; mixed sheet: order 1765234

4. Superfamily d.136.1: Phospholipase D/nuclease [56024] (6 families)

5. Family d.136.1.3: Tyrosyl-DNA phosphodiesterase TDP1 [69815] (2 proteins)

6. Protein automated matches [233597] (1 species)
   not a true protein

7. Species Saccharomyces cerevisiae [TaxId:559292] [233598] (4 PDB entries)

8. Domain d3sq3a2: 3sq3 A:294-540 [233600]
   automated match to d1q32a2
   mutant

Details for d3sq3a2

PDB Entry: 3sq3, 2.5 Å

PDB Description: Crystal Structure Analysis of the Yeast Tyrosyl-DNA Phosphodiesterase H182A Mutant

PDB Compounds: (A:) tyrosyl-DNA phosphodiesterase 1

SCOPe Domain Sequences for d3sq3a2:

Sequence, based on SEQRES records:

>d3sq3a2 d.136.1.3 (A:294-540) automated matches {Saccharomyces cerevisiae [TaxId: 559292]}
sagtsasdtakhylcqtssigtslsrardenlwthlmiplftgimsppakdtagrkkaei
lptnslineysqrkikpyiifpteqefvtsplkwsssgwfhfqylqkksyyemlrnkfkv
fykqdpamvtrrrgttpahskfymhcatnsagpcdasqvfkelewclytsanlsqtawgt
vsrkprnyeagvlyhsrrlantrkvtcrtftrdrrgcagnpthvavpftlpvipydlaed
ecfclal

Sequence, based on observed residues (ATOM records):

>d3sq3a2 d.136.1.3 (A:294-540) automated matches {Saccharomyces cerevisiae [TaxId: 559292]}
sdtakhylcqtssigtslsrardenlwthlmiplftgimsppilptnslineysqrkikp
yiifpteqefvtsplkwsssgwfhfqylqkksyyemlrnkfkvfykqdpamvtrrrgttp
ahskfymhcatnsqvfkelewclytsanlsqtawgtvsrkprnyeagvlyhsrrlantrk
vtcrtftrdpthvavpftlpvipydlaedecfclal

Timeline for d3sq3a2:

• d3sq3a2 is new in SCOPe 2.03-stable
  
• d3sq3a2 appears in SCOPe 2.04
  
• d3sq3a2 appears in the current release, SCOPe 2.08