SCOPe 2.05: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.05
Class f: Membrane and cell surface proteins and peptides [56835] (57 folds)
Fold f.10: Viral glycoprotein, central and dimerisation domains [56982] (1 superfamily)
2 intertwined domains; all-beta and alpha+beta
Superfamily f.10.1: Viral glycoprotein, central and dimerisation domains [56983] (2 families)
Family f.10.1.0: automated matches [227258] (1 protein)
not a true family
Protein automated matches [227047] (5 species)
not a true protein

Species:

Chikungunya virus [TaxId:37124] [226026] (2 PDB entries)
1. Domain for 3n43:
  - Domain d3n43f1: 3n43 F:-1-292 [213716]
    Other proteins in same PDB: d3n43f2
    automated match to d2alaa2
    complexed with act, nag
2. Domain for 3n44:
  - Domain d3n44f1: 3n44 F:1-292 [213718]
    Other proteins in same PDB: d3n44f2
    automated match to d2alaa2
    complexed with act, nag, os
Dengue virus 1 [TaxId:11059] [226543] (2 PDB entries)
1. Domains for 4gsx:
  1. Domain d4gsxa1: 4gsx A:2-297 [222123]
    Other proteins in same PDB: d4gsxa2, d4gsxb2
    automated match to d1urza2
    complexed with cd, cl, nag
  2. Domain d4gsxb1: 4gsx B:2-297 [222125]
    Other proteins in same PDB: d4gsxa2, d4gsxb2
    automated match to d1urza2
    complexed with cd, cl, nag
2. Domains for 4gt0:
  1. Domain d4gt0a1: 4gt0 A:2-297 [222131]
    Other proteins in same PDB: d4gt0a2, d4gt0b2
    automated match to d1urza2
    complexed with cd, cl, nag
  2. Domain d4gt0b1: 4gt0 B:2-297 [222133]
    Other proteins in same PDB: d4gt0a2, d4gt0b2
    automated match to d1urza2
    complexed with cd, cl, nag
Dengue virus 2 [TaxId:11060] [268948] (2 PDB entries)
1. Domains for 4uta:
  1. Domain d4utaa1: 4uta A:1-297 [268956]
    Other proteins in same PDB: d4utaa2, d4utab2, d4utal1, d4utal2, d4utam1, d4utam2
    automated match to d4gsxa1
  2. Domain d4utab1: 4uta B:1-297 [268958]
    Other proteins in same PDB: d4utaa2, d4utab2, d4utal1, d4utal2, d4utam1, d4utam2
    automated match to d4gsxa1
2. Domains for 4utc:
  1. Domain d4utca1: 4utc A:1-297 [268952]
    Other proteins in same PDB: d4utca2, d4utcb2
    automated match to d4gsxa1
  2. Domain d4utcb1: 4utc B:1-297 [268949]
    Other proteins in same PDB: d4utca2, d4utcb2
    automated match to d4gsxa1
Japanese encephalitis virus [TaxId:11072] [226036] (1 PDB entry)
- Domain for 3p54:
  - Domain d3p54a1: 3p54 A:1-299 [214662]
    Other proteins in same PDB: d3p54a2
    automated match to d1urza2
West Nile virus [TaxId:11082] [255208] (2 PDB entries)
1. Domain for 2hg0:
  - Domain d2hg0a1: 2hg0 A:1-300 [242033]
    Other proteins in same PDB: d2hg0a2
    automated match to d1urza2
2. Domain for 2i69:
  - Domain d2i69a1: 2i69 A:1-300 [242088]
    Other proteins in same PDB: d2i69a2
    automated match to d3p54a1

More info for Protein automated matches from f.10.1.0: automated matches

Timeline for Protein automated matches from f.10.1.0: automated matches:

Protein automated matches from f.10.1.0: automated matches first appeared in SCOPe 2.03
Protein automated matches from f.10.1.0: automated matches appears in SCOPe 2.04
Protein automated matches from f.10.1.0: automated matches appears in SCOPe 2.06
Protein automated matches from f.10.1.0: automated matches appears in the current release, SCOPe 2.08