SCOP 1.67: Domain d2ramb2: 2ram B:19-191

Lineage for d2ramb2 (2ram B:19-191)

1. Root: SCOP 1.67

2. Class b: All beta proteins [48724] (141 folds)

3. Fold b.2: Common fold of diphtheria toxin/transcription factors/cytochrome f [49379] (8 superfamilies)
   sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold

4. Superfamily b.2.5: p53-like transcription factors [49417] (6 families)

5. Family b.2.5.3: Rel/Dorsal transcription factors, DNA-binding domain [81315] (6 proteins)

6. Protein p65 subunit of NF-kappa B (NFKB), N-terminal domain [49428] (3 species)

7. Species Mouse (Mus musculus) [TaxId:10090] [49429] (7 PDB entries)

8. Domain d2ramb2: 2ram B:19-191 [22451]
   Other proteins in same PDB: d2rama1, d2ramb1
   protein/DNA complex; complexed with 5iu, dtt

Details for d2ramb2

PDB Entry: 2ram, 2.4 Å

PDB Description: a novel dna recognition mode by nf-kb p65 homodimer

SCOP Domain Sequences for d2ramb2:

Sequence; same for both SEQRES and ATOM records:

>d2ramb2 b.2.5.3 (B:19-191) p65 subunit of NF-kappa B (NFKB), N-terminal domain {Mouse (Mus musculus)}
pyveiieqpkqrgmrfrykcegrsagsipgerstdttkthptikingytgpgtvrislvt
kdpphrphphelvgkdcrdgyyeadlcpdrsihsfqnlgiqcvkkrdleqaisqriqtnn
npfhvpieeqrgdydlnavrlcfqvtvrdpagrpllltpvlshpifdnrapnt

Timeline for d2ramb2:

• d2ramb2 first appeared (with stable ids) in SCOP 1.55
  
• d2ramb2 appears in SCOP 1.65
  
• d2ramb2 appears in SCOP 1.69
  
• d2ramb2 appears in the current release, SCOPe 2.08