SCOPe 2.05: Domain d4gtmb_: 4gtm B:

Lineage for d4gtmb_ (4gtm B:)

1. Root: SCOPe 2.05

2. Class a: All alpha proteins [46456] (286 folds)

3. Fold a.102: alpha/alpha toroid [48207] (6 superfamilies)
   multihelical; up to seven alpha-hairpins are arranged in closed circular array; there may be sequence similarities between different superfamilies

4. Superfamily a.102.4: Terpenoid cyclases/Protein prenyltransferases [48239] (5 families)

5. Family a.102.4.3: Protein prenyltransferases [48246] (3 proteins)

6. Protein Protein farnesyltransferase, beta-subunit [48247] (2 species)

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [48248] (50 PDB entries)
   Uniprot Q02293 22-418 P53610

8. Domain d4gtmb_: 4gtm B: [222157]
   Other proteins in same PDB: d4gtma_
   automated match to d4gtpb_
   complexed with 7tm, dms, fpp, zn

Details for d4gtmb_

PDB Entry: 4gtm, 2.2 Å

PDB Description: FTase in complex with BMS analogue 11

PDB Compounds: (B:) Protein farnesyltransferase subunit beta

SCOPe Domain Sequences for d4gtmb_:

Sequence; same for both SEQRES and ATOM records:

>d4gtmb_ a.102.4.3 (B:) Protein farnesyltransferase, beta-subunit {Norway rat (Rattus norvegicus) [TaxId: 10116]}
wseplyslrpeharerlqddsvetvtsieqakveekiqevfssykfnhlvprlvlqrekh
fhylkrglrqltdayecldasrpwlcywilhslelldepipqivatdvcqflelcqspdg
gfgggpgqyphlaptyaavnalciigteeaynvinrekllqylyslkqpdgsflmhvgge
vdvrsaycaasvasltniitpdlfegtaewiarcqnweggiggvpgmeahggytfcglaa
lvilkkerslnlksllqwvtsrqmrfeggfqgrcnklvdgcysfwqagllpllhralhaq
gdpalsmshwmfhqqalqeyilmccqcpagglldkpgksrdfyhtcyclsglsiaqhfgs
gamlhdvvmgvpenvlqpthpvynigpdkviqatthflqkpvpgf

Timeline for d4gtmb_:

• d4gtmb_ first appeared in SCOPe 2.03
  
• d4gtmb_ appears in SCOPe 2.04
  
• d4gtmb_ appears in SCOPe 2.06
  
• d4gtmb_ appears in the current release, SCOPe 2.08