SCOPe 2.06: Domain d4gtdb1: 4gtd B:1-220

Lineage for d4gtdb1 (4gtd B:1-220)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.207: Thymidylate synthase-complementing protein Thy1 [69795] (1 superfamily)
   complex alpha+beta fold; contains antiparallel 5-stranded beta-sheet: order 12354

4. Superfamily d.207.1: Thymidylate synthase-complementing protein Thy1 [69796] (2 families)
   automatically mapped to Pfam PF02511

5. Family d.207.1.1: Thymidylate synthase-complementing protein Thy1 [69797] (2 proteins)

6. Protein Thy1 homologue [69798] (1 species)

7. Species Thermotoga maritima [TaxId:2336] [69799] (25 PDB entries)
   TM0449

8. Domain d4gtdb1: 4gtd B:1-220 [222153]
   Other proteins in same PDB: d4gtda2, d4gtdb2, d4gtdd2
   automated match to d4gted_
   complexed with fad, ump; mutant

Details for d4gtdb1

PDB Entry: 4gtd, 1.76 Å

PDB Description: T. Maritima FDTS (E144R mutant) with FAD and dUMP

PDB Compounds: (B:) Thymidylate synthase thyX

SCOPe Domain Sequences for d4gtdb1:

Sequence, based on SEQRES records:

>d4gtdb1 d.207.1.1 (B:1-220) Thy1 homologue {Thermotoga maritima [TaxId: 2336]}
mkidildkgfvelvdvmgndlsavraarvsfdmglkdeerdrhlieylmkhghetpfehi
vftfhvkapifvarqwfrhriasynelsgrysklsyefyipsperlegykttippervte
kiseivdkayrtyleliesgvprrvarivlplnlytrffwtvnarslmnflnlradshaq
weiqqyalaiarifkekcpwtfeaflkyaykgdilkevqv

Sequence, based on observed residues (ATOM records):

>d4gtdb1 d.207.1.1 (B:1-220) Thy1 homologue {Thermotoga maritima [TaxId: 2336]}
mkidildkgfvelvdvmgndlsavraarvsfdeerdrhlieylmkhghetpfehivftfh
vkapifvarqwfrhriasynelsgrylsyefyipsperlegykttippervtekiseivd
kayrtyleliesgvprrvarivlplnlytrffwtvnarslmnflnlradshaqweiqqya
laiarifkekcpwtfeaflkyaykgdilkevqv

Timeline for d4gtdb1:

• d4gtdb1 first appeared in SCOPe 2.03, called d4gtdb_
  
• d4gtdb1 was called d4gtdb_ in SCOPe 2.05
  
• d4gtdb1 appears in SCOPe 2.07
  
• d4gtdb1 appears in the current release, SCOPe 2.08