Lineage for d3ztda_ (3ztd A:)

  1. Root: SCOPe 2.07
  2. 2530962Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2538334Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2538335Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2538336Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 2538361Protein Elongin B [54246] (2 species)
  7. 2538362Species Human (Homo sapiens) [TaxId:9606] [54247] (51 PDB entries)
  8. 2538457Domain d3ztda_: 3ztd A: [218470]
    Other proteins in same PDB: d3ztdb_, d3ztdc_, d3ztde_, d3ztdf_, d3ztdh_, d3ztdi_, d3ztdk_, d3ztdl_
    automated match to d1lm8b_
    complexed with ztd

Details for d3ztda_

PDB Entry: 3ztd (more details), 2.79 Å

PDB Description: pVHL54-213-EloB-EloC complex _ methyl 4-(((2S,4R)-4-hydroxy-1-(2-(3- methylisoxazol-5-yl)acetyl)pyrrolidine-2-carboxamido)methyl)benzoate
PDB Compounds: (A:) Transcription elongation factor B polypeptide 2

SCOPe Domain Sequences for d3ztda_:

Sequence, based on SEQRES records: (download)

>d3ztda_ d.15.1.1 (A:) Elongin B {Human (Homo sapiens) [TaxId: 9606]}
mdvflmirrhkttiftdakesstvfelkrivegilkrppdeqrlykddqllddgktlgec
gftsqtarpqapatvglafraddtfealciepfssppelpdvm

Sequence, based on observed residues (ATOM records): (download)

>d3ztda_ d.15.1.1 (A:) Elongin B {Human (Homo sapiens) [TaxId: 9606]}
mdvflmirrhkttiftdakesstvfelkrivegilkrppdeqrlykddqllddgktlgec
gftsqtarpqapatvglafradtfealciepfssppelpdvm

SCOPe Domain Coordinates for d3ztda_:

Click to download the PDB-style file with coordinates for d3ztda_.
(The format of our PDB-style files is described here.)

Timeline for d3ztda_: