SCOPe 2.05: Domain d3sfgb_: 3sfg B:

Lineage for d3sfgb_ (3sfg B:)

1. Root: SCOPe 2.05

2. Class e: Multi-domain proteins (alpha and beta) [56572] (68 folds)

3. Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
   divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members

4. Superfamily e.8.1: DNA/RNA polymerases [56672] (7 families)
   "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain

5. Family e.8.1.4: RNA-dependent RNA-polymerase [56694] (3 proteins)

6. Protein automated matches [190260] (26 species)
   not a true protein

7. Species Murine norovirus 1 [TaxId:223997] [189982] (8 PDB entries)

8. Domain d3sfgb_: 3sfg B: [216382]
   automated match to d3naha_
   protein/RNA complex; complexed with 2tu, gol, mg, so4

Details for d3sfgb_

PDB Entry: 3sfg, 2.21 Å

PDB Description: crystal structure of murine norovirus RNA dependent RNA polymerase in complex with 2thiouridine(2TU)

PDB Compounds: (B:) RNA polymerase

SCOPe Domain Sequences for d3sfgb_:

Sequence, based on SEQRES records:

>d3sfgb_ e.8.1.4 (B:) automated matches {Murine norovirus 1 [TaxId: 223997]}
lprpsgtyaglpiadygdapplstktmfwrtspeklppgawepaylgskdervdgpslqq
vmrdqlkpyseprgllppqeildavcdaienrlentlepqkpwtfkkacesldkntssgy
pyhkqkskdwtgsafigdlgdqathannmyemgksmrpiytaalkdelvkpdkiygkikk
rllwgsdlgtmiraarafgpfcdalketcifnpirvgmsmnedgpfifarhanfryhmda
dytrwdstqqrailkragdimvrlspepdlarvvmddllapslldvgdykivveeglpsg
cpcttqlnslahwiltlcamvevtrvdpdivmqesefsfygddevvstnleldmvkytma
lrrygllptradkeegplerrqtlqgisflrraivgdqfgwygrldrasidrqllwtkgp
nhqnpfetlpghaqrpsqlmallgeaamhgekyyrtvasrvskeaaqsgiemvvprhrsv
lrwvrfg

Sequence, based on observed residues (ATOM records):

>d3sfgb_ e.8.1.4 (B:) automated matches {Murine norovirus 1 [TaxId: 223997]}
lprpsgtyaglpiadygdapplstktmfwrtspeklppgawepaylgskdervdgpslqq
vmrdqlkpyseprgllppqeildavcdaienrlentlepqkpwtfkkacesldkntssgy
pyhkqkskdwtgsafigdlgdqathannmyemgksmrpiytaalkdelvkpdkiygkikk
rllwgsdlgtmiraarafgpfcdalketcifnpirvgmsmnedgpfifarhanfryhmda
dytrwdstqqrailkragdimvrlspepdlarvvmddllapslldvgdykivveeglpsg
cpcttqlnslahwiltlcamvevtrvdpdivmqesefsfygddevvstnleldmvkytma
lrrygllptradkegplerrqtlqgisflrraivgdqfgwygrldrasidrqllwtkgpn
hqnpfetlpghasqlmallgeaamhgekyyrtvasrvsmvvprhrsvlrwvrfg

Timeline for d3sfgb_:

• d3sfgb_ first appeared in SCOPe 2.03
  
• d3sfgb_ appears in SCOPe 2.04
  
• d3sfgb_ appears in SCOPe 2.06
  
• d3sfgb_ appears in the current release, SCOPe 2.08