Lineage for Family e.8.1.4: RNA-dependent RNA-polymerase

  1. Root: SCOPe 2.05
  2. 1949014Class e: Multi-domain proteins (alpha and beta) [56572] (68 folds)
  3. 1951566Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
    divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members
  4. 1951567Superfamily e.8.1: DNA/RNA polymerases [56672] (7 families) (S)
    "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain
  5. 1952391Family e.8.1.4: RNA-dependent RNA-polymerase [56694] (3 proteins)

Proteins:

  1. 1952392Reovirus polymerase lambda3 [82841] (1 species)
    contains additional N-terminal domain (res. 1-380) and C-terminal "bracelet" domain (res. 891-1267)
  2. 1952399Viral RNA polymerase [56695] (17 species)
    1. 1952400Species Avian infectious bursal disease virus [TaxId:10995] [160955] (1 PDB entry)
      Uniprot Q9Q6Q5 31-804
    2. 1952402Species Bovine viral diarrhea virus [TaxId:11099] [103401] (3 PDB entries)
    3. 1952409Species Foot-and-mouth disease virus - type c [TaxId:12116] [187085] (9 PDB entries)
    4. 1952419Species Foot-and-mouth disease virus [TaxId:12110] [111302] (7 PDB entries)
      Uniprot Q9QCE4 1858-2327
    5. 1952429Species Hepatitis C virus isolate bk [TaxId:11105] [195056] (4 PDB entries)
    6. 1952438Species Hepatitis c virus isolate [TaxId:420174] [188905] (18 PDB entries)
    7. 1952473Species Hepatitis c virus subtype 1a [TaxId:31646] [189928] (4 PDB entries)
    8. 1952480Species Hepatitis C virus [TaxId:11103] [56697] (72 PDB entries)
    9. 1952617Species Hepatitis C virus [TaxId:356411] [193797] (2 PDB entries)
    10. 1952620Species Human poliovirus 1 [TaxId:12081] [256393] (8 PDB entries)
    11. 1952629Species Human rhinovirus 14, HRV-14 [TaxId:12131] [111301] (1 PDB entry)
      Uniprot P03303 1720-2179
    12. 1952631Species Human rhinovirus 16 [TaxId:31708] [188024] (2 PDB entries)
    13. 1952639Species Human rhinovirus 16, HRV-16 [TaxId:31708] [111300] (1 PDB entry)
      Uniprot Q82122 1694-2153
    14. 1952642Species Human rhinovirus 1B, HRV-1B [TaxId:12129] [111299] (1 PDB entry)
      Uniprot P12916 1698-2157
    15. 1952644Species Norwalk virus [TaxId:11983] [103400] (8 PDB entries)
    16. 1952655Species Poliovirus type 1, strain Mahoney [TaxId:12080] [56696] (12 PDB entries)
      Uniprot P03300 1748-2208
    17. 1952687Species Rabbit hemorrhagic disease virus [TaxId:11976] [69882] (2 PDB entries)
  3. 1952692automated matches [190260] (26 species)
    not a true protein
    1. 1952693Species Bovine viral diarrhea virus [TaxId:11099] [255087] (1 PDB entry)
    2. 1952695Species Coxsackievirus b3 [TaxId:103903] [188493] (5 PDB entries)
    3. 1952701Species Coxsackievirus b3 [TaxId:12072] [271111] (2 PDB entries)
    4. 1952704Species Foot-and-mouth disease virus [TaxId:12120] [272422] (2 PDB entries)
    5. 1952707Species Hepatitis B virus [TaxId:10407] [259720] (1 PDB entry)
    6. 1952709Species Hepatitis c virus (isolate 1) [TaxId:11104] [261697] (1 PDB entry)
    7. 1952711Species Hepatitis C virus isolate bk [TaxId:11105] [188687] (11 PDB entries)
    8. 1952734Species Hepatitis c virus isolate hc-j6 [TaxId:11113] [189608] (1 PDB entry)
    9. 1952736Species Hepatitis c virus isolate hc-j8 [TaxId:11115] [188981] (2 PDB entries)
    10. 1952741Species Hepatitis c virus isolate [TaxId:420174] [188851] (1 PDB entry)
    11. 1952744Species Hepatitis c virus jfh-1 [TaxId:356411] [189047] (3 PDB entries)
    12. 1952751Species Hepatitis c virus subtype 1a [TaxId:31646] [189338] (1 PDB entry)
    13. 1952755Species Hepatitis c virus subtype 1b [TaxId:31647] [187148] (3 PDB entries)
    14. 1952764Species Hepatitis C virus [TaxId:11103] [187048] (40 PDB entries)
    15. 1952849Species Hepatitis C virus [TaxId:11105] [188793] (3 PDB entries)
    16. 1952855Species Hepatitis C virus [TaxId:333284] [188792] (1 PDB entry)
    17. 1952857Species Hepatitis C virus [TaxId:356411] [189609] (1 PDB entry)
    18. 1952859Species Hepatitis C virus [TaxId:420174] [189885] (4 PDB entries)
    19. 1952867Species Human coxsackievirus B3 [TaxId:12072] [193138] (3 PDB entries)
    20. 1952880Species Human coxsackievirus [TaxId:12072] [188608] (1 PDB entry)
    21. 1952882Species Human enterovirus 71 [TaxId:39054] [189988] (4 PDB entries)
    22. 1952887Species Human poliovirus 1 [TaxId:12081] [193135] (16 PDB entries)
    23. 1952909Species Human rhinovirus a16 [TaxId:31708] [193142] (1 PDB entry)
    24. 1952911Species Murine norovirus 1 [TaxId:223997] [189982] (8 PDB entries)
    25. 1952939Species Murine norovirus [TaxId:223997] [226374] (2 PDB entries)
    26. 1952946Species Norwalk-like virus [TaxId:95340] [260334] (1 PDB entry)

More info for Family e.8.1.4: RNA-dependent RNA-polymerase

Timeline for Family e.8.1.4: RNA-dependent RNA-polymerase: